VitaminP: a vision transformer-assisted multimodal integration network for pathology cell segmentation
☆13Oct 14, 2026Updated 2 weeks ago
Alternatives and similar repositories for VitaminP
Users that are interested in VitaminP are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆22Aug 9, 2026Updated 2 months ago
- Repository in Support of EAGLE Submission☆28Oct 11, 2025Updated last year
- The spatial representation learning for single-cell spatial transcriptomics☆17Aug 4, 2026Updated 2 months ago
- Hover-net for nuclei instance segmentation and classification☆17Feb 15, 2022Updated 4 years ago
- PathoPatcher is a Python project designed for accelerating Whole Slide Image Preprocessing, employing AI-based preprocessing techniques w…☆13May 8, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆17Jul 16, 2024Updated 2 years ago
- A package for the analysis of Imaging Mass Cytometry data☆17Mar 25, 2026Updated 7 months ago
- Piecewise alignment for layers of mosaics☆66Oct 17, 2026Updated last week
- Enhanced stain normalization for histopathology images with batch processing support. Optimized for CPU, GPU (CUDA), and MPS (Apple Silic…☆26Aug 9, 2026Updated 2 months ago
- Powerful and lightweight package to identify tissue compartments in spatial transcriptomics datasets.☆22Jun 9, 2025Updated last year
- An R package for fast topic inference to identify tissue architecture in multiplexed images☆18Jun 5, 2026Updated 4 months ago
- Whole Slide image (WSI) conversion for brightfield histology images☆42Oct 19, 2026Updated last week
- A modern Python library for converting Mass Spectrometry Imaging (MSI) data into standardized SpatialData/Zarr format, enabling seamless …☆26Updated this week
- Facilitating the use of Deep Visual Proteomics☆22Sep 16, 2026Updated last month
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Computer simulator of multiplex tissue images from a set of user-defined parameters☆11Dec 13, 2022Updated 3 years ago
- Efficient data structures and IO for whole slide image analysis☆34Oct 1, 2026Updated 3 weeks ago
- Intracellular Transcriptomic Analysis Toolkit (InSTAnT)☆13Feb 28, 2025Updated last year
- Interactive Segmentation of Nucleus☆69Nov 22, 2022Updated 3 years ago
- A flexible parser generator producing output from object-oriented hierarchical context-free grammar specifications.☆12Nov 16, 2021Updated 4 years ago
- Analysis framework for morphological profiling data☆14Updated this week
- Profile purification of single-cell spatial transcriptomics data☆67Jun 29, 2026Updated 4 months ago
- SCALLOPS (Scalable Library for Optical Pooled Screens) is a comprehensive Python package designed to streamline and scale the analysis of…☆16Updated this week
- ggCorpIdent: A package for ggplot2 graphics in corporate design with custom fonts, colors and logo.☆13Apr 4, 2019Updated 7 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- A Snakemake pipeline for Xenium data analysis.☆28Jul 22, 2026Updated 3 months ago
- GrandQC tool for tissue detection and quality control in pathology☆129Dec 27, 2025Updated 10 months ago
- ☆15Nov 8, 2024Updated last year
- ☆13May 14, 2025Updated last year
- A library for interfacing with SpatialData stores in TS/JS☆11Updated this week
- Persistent homology of chromatic alpha complexes☆11Oct 20, 2026Updated last week
- DeepSpot: Deep learning model for predicting spatial transcriptomics from H&E histopathology images. Supports spot-level (Visium) and sin…☆104Updated this week
- A performant scientific image visualization system.☆36Aug 5, 2026Updated 2 months ago
- Build contrasts for models defined with formulaic☆13Oct 19, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Immunocto is a large immune cell database obtained from H&E whole slide images.☆15Dec 10, 2024Updated last year
- Spatialproteomics is a light weight wrapper around xarray with the intention to facilitate the data exploration and analysis of highly mu…☆84Updated this week
- Code for the First Place Solution in OCELOT 2023: Cell Detection from Cell-Tissue Interaction☆11Sep 11, 2023Updated 3 years ago
- UNet script, model, sample data☆14Feb 19, 2025Updated last year
- ☆12Sep 29, 2026Updated last month
- Fast, scalable whole-slide encoding☆16Oct 19, 2026Updated last week
- A foundation model-driven whole slide image-scale cell phenotyping method with QuPath integration Resources☆39Oct 16, 2026Updated last week