benjaminleroy / cowpatchLinks
pythonic ggplot image combinations https://benjaminleroy.github.io/cowpatch
☆10Updated 2 years ago
Alternatives and similar repositories for cowpatch
Users that are interested in cowpatch are comparing it to the libraries listed below
Sorting:
- Seamlessly integrate R packages into Python.☆21Updated 2 years ago
- a minimal, scriptable genome browser for python☆51Updated 8 months ago
- A performant scientific image visualization system.☆35Updated last month
- Turn an existing conda environment into a Singularity container☆81Updated 2 years ago
- A versatile, fully open-source pipeline to extract phenotypic measurements from plant images☆42Updated 3 months ago
- Data Science Operations (dso) command line tool☆41Updated this week
- script + metadata = standalone component☆43Updated last week
- Genomic Features in Python from BioConductor's AnnotationHub☆22Updated last week
- NetworkCommons is a community-driven platform designed to simplify access to tools and resources for inferring context-specific protein i…☆25Updated last month
- A Github action for running a Snakemake workflow☆58Updated 2 months ago
- Notebooks accompanying the paper "Navigating the pitfalls of applying machine learning in genomics"☆45Updated last year
- Single Rust: Pioneering single-cell analysis with Rust's concurrency for scalable, high-throughput pipelines. 🧬🚀☆61Updated last month
- Fast Gene Set Enrichment Analysis (GSEA) implementation of the prerank algorithm. Use Loess interpolation of bimodal ES distribution for …☆51Updated 3 months ago
- Multi-omics factor analysis v2☆48Updated 10 months ago
- ☆33Updated this week
- ☆32Updated last year
- Functional Associations using Variational Autoencoders☆40Updated 3 weeks ago
- Monitor computational workflows in real time☆74Updated last year
- Feature-rich Python implementation of the tximport package for gene count estimation.☆37Updated last month
- FA2021 Bootcamp course website for the incoming cohort of the Bioinformatics & Systems Biology Ph.D. program☆19Updated 3 years ago
- Builds a PEP from SRA or GEO accessions☆53Updated last month
- Single cell type annotation guided by cell atlases, with freedom to be queer☆25Updated 3 years ago
- The Ross-Ibarra's lab documentation☆26Updated 3 years ago
- Fit generalized linear models in python.☆28Updated 2 years ago
- R API and htmlwidget for Vitessce☆42Updated 2 weeks ago
- Inferring gene co-expression networks from single cell gene expression data☆28Updated 3 years ago
- A rust framework to make using alevin-fry even simpler☆57Updated 4 months ago
- Access nextflow variables from python scripts or notebooks☆20Updated 4 years ago
- ☆16Updated 7 months ago
- The AnnSQL package enables SQL based queries on AnnData objects.☆30Updated last week