benjaminleroy / cowpatchLinks
pythonic ggplot image combinations https://benjaminleroy.github.io/cowpatch
☆10Updated 2 years ago
Alternatives and similar repositories for cowpatch
Users that are interested in cowpatch are comparing it to the libraries listed below
Sorting:
- Seamlessly integrate R packages into Python.☆21Updated 2 years ago
- Turn an existing conda environment into a Singularity container☆80Updated 2 years ago
- a minimal, scriptable genome browser for python☆51Updated 6 months ago
- Notebooks accompanying the paper "Navigating the pitfalls of applying machine learning in genomics"☆45Updated last year
- script + metadata = standalone component☆42Updated this week
- ☆32Updated last year
- A Snakemake executor plugin for submitting jobs to a SLURM cluster☆38Updated last week
- Make customized upset plots: from raw data to plots☆61Updated last year
- A performant scientific image visualization system.☆35Updated this week
- A short tutorial on getting started with Snakemake for workflow management☆53Updated 6 years ago
- omniCLIP is a CLIP-Seq peak caller☆16Updated 4 years ago
- Data Science Operations (dso) command line tool☆41Updated 2 months ago
- NetworkCommons is a community-driven platform designed to simplify access to tools and resources for inferring context-specific protein i…☆25Updated 2 months ago
- Fast Gene Set Enrichment Analysis (GSEA) implementation of the prerank algorithm. Use Loess interpolation of bimodal ES distribution for …☆49Updated 2 months ago
- Universal RObust Peak Annotator☆16Updated last year
- Functional Associations using Variational Autoencoders☆39Updated 5 months ago
- A versatile, fully open-source pipeline to extract phenotypic measurements from plant images☆42Updated last month
- A template for standard compliant snakemake-workflows☆104Updated 3 weeks ago
- Pandas API for multiple Gene Set Enrichment Analysis implementations in Python (GSEApy, cudaGSEA, GSEA)☆15Updated 2 years ago
- Fit generalized linear models in python.☆28Updated 2 years ago
- Monitor computational workflows in real time☆74Updated last year
- Course website for Genomic Data Visualization 2024☆25Updated last year
- FA2021 Bootcamp course website for the incoming cohort of the Bioinformatics & Systems Biology Ph.D. program☆19Updated 3 years ago
- A Github action for running a Snakemake workflow☆59Updated last month
- A rust framework to make using alevin-fry even simpler☆54Updated 2 months ago
- Multi-omics factor analysis v2☆47Updated 8 months ago
- Legend made easy for matplotlib☆28Updated last month
- Modelling DNA methylation profiles☆23Updated 5 years ago
- Transcript quantification import with automatic metadata detection☆68Updated 3 weeks ago
- Curated list of TCGA resources☆56Updated 7 years ago