Alternatives and similar repositories for cowpatch

Users that are interested in cowpatch are comparing it to the libraries listed below

• chaichontat / samui
  A performant scientific image visualization system.
  ☆36Updated last week
• kpj / rwrap
  Seamlessly integrate R packages into Python.
  ☆21Updated 2 years ago
• krassowski / gsea-api
  Pandas API for multiple Gene Set Enrichment Analysis implementations in Python (GSEApy, cudaGSEA, GSEA)
  ☆15Updated 2 years ago
• grst / containerize-conda
  Turn an existing conda environment into a Singularity container
  ☆81Updated 2 years ago
• ratan-lab / sumo
  Subtyping tool for multi-omic data
  ☆13Updated 3 years ago
• jokergoo / KeywordsEnrichment
  ☆31Updated last year
• Gregor-Mendel-Institute / aradeepopsis
  A versatile, fully open-source pipeline to extract phenotypic measurements from plant images
  ☆45Updated 5 months ago
• cxli233 / customized_upset_plots
  Make customized upset plots: from raw data to plots
  ☆61Updated last month
• snakemake / snakemake-github-action
  A Github action for running a Snakemake workflow
  ☆60Updated 4 months ago
• cxli233 / ggpathway
  A tutorial for pathway visualization using tidyverse, igraph, and ggraph
  ☆60Updated last year
• Boehringer-Ingelheim / dso
  Data Science Operations (dso) command line tool
  ☆44Updated last month
• anders-biostat / sleepwalk
  Exploring dimension-reduced embeddings
  ☆110Updated 3 years ago
• shwhalen / ml-pitfalls
  Notebooks accompanying the paper "Navigating the pitfalls of applying machine learning in genomics"
  ☆45Updated 2 years ago
• laminlabs / nbproject
  Light-weight Jupyter notebook tracker.
  ☆34Updated 6 months ago
• grst / nxfvars
  Access nextflow variables from python scripts or notebooks
  ☆20Updated 4 years ago
• NBISweden / workshop-reproducible-research
  NBIS/Elixir course: Tools for Reproducible Research
  ☆64Updated last week
• willtownes / glmpca
  ☆95Updated last year
• depictio / depictio
  Bioinformatics web-platform visualisation dashboard creation
  ☆27Updated last week
• pachterlab / MCML
  ☆33Updated 4 years ago
• snakemake / snakemake-lang-vscode-plugin
  Language support and snippets for Snakemake workflows (Snakefile, *.smk) for Visual Studio Code and Apache Theia.
  ☆21Updated last month
• waldronlab / data-science-seminar
  Topics In Data Science and Bioinformatics
  ☆79Updated last year
• mkanai / grimon
  R package for plotting 3D graphical visualization of multi-omics data.
  ☆23Updated 3 years ago
• panoptes-organization / panoptes
  Monitor computational workflows in real time
  ☆73Updated last year
• viash-io / viash
  script + metadata = standalone component
  ☆43Updated 3 weeks ago
• andreaskapou / BPRMeth
  Modelling DNA methylation profiles
  ☆23Updated 5 years ago
• manzt / pygv
  a minimal, scriptable genome browser for python
  ☆51Updated 10 months ago
• mragsac / BISB-Bootcamp-2021
  FA2021 Bootcamp course website for the incoming cohort of the Bioinformatics & Systems Biology Ph.D. program
  ☆19Updated 4 years ago
• gregbellan / Stabl
  ☆67Updated 11 months ago
• gosling-lang / gos
  A declarative interactive genomics visualization library for Python.
  ☆229Updated 2 weeks ago
• drisso / zinbwave
  Clone of the Bioconductor repository for the zinbwave package, see https://bioconductor.org/packages/zinbwave
  ☆45Updated last year