benjaminleroy / cowpatchLinks
pythonic ggplot image combinations https://benjaminleroy.github.io/cowpatch
☆10Updated 2 years ago
Alternatives and similar repositories for cowpatch
Users that are interested in cowpatch are comparing it to the libraries listed below
Sorting:
- Seamlessly integrate R packages into Python.☆21Updated 2 years ago
- Turn an existing conda environment into a Singularity container☆82Updated 3 years ago
- Make customized upset plots: from raw data to plots☆62Updated 3 months ago
- a minimal, scriptable genome browser for python☆53Updated last year
- A performant scientific image visualization system.☆36Updated 2 weeks ago
- A versatile, fully open-source pipeline to extract phenotypic measurements from plant images☆47Updated 6 months ago
- Monitor computational workflows in real time☆74Updated last year
- Data Science Operations (dso) command line tool☆44Updated 3 months ago
- A Github action for running a Snakemake workflow☆62Updated last week
- Access nextflow variables from python scripts or notebooks☆20Updated 4 years ago
- Notebooks accompanying the paper "Navigating the pitfalls of applying machine learning in genomics"☆46Updated 2 years ago
- Defense Against the Dark Arts☆79Updated last year
- Modelling DNA methylation profiles☆24Updated 5 years ago
- A short tutorial on getting started with Snakemake for workflow management☆56Updated 6 years ago
- Functional Associations using Variational Autoencoders☆40Updated last week
- Rust Backend for PyRanges Operations. More featureful and much faster replacement for the NCLS library☆29Updated this week
- script + metadata = standalone component☆44Updated 2 weeks ago
- Statistical analysis, clustering and visualinzing scientific data with hassle free☆26Updated 5 months ago
- Picasso: a methods for embedding points in 2D in a way that respects distances while fitting a user-specified shape.☆71Updated 2 months ago
- Transcript quantification import with automatic metadata detection☆67Updated this week
- Single Rust: Pioneering single-cell analysis with Rust's concurrency for scalable, high-throughput pipelines. 🧬🚀☆82Updated 3 weeks ago
- Methods for summarizing and visualizing multi-biosample functional genomic annotations☆46Updated 8 months ago
- Pandas API for multiple Gene Set Enrichment Analysis implementations in Python (GSEApy, cudaGSEA, GSEA)☆16Updated 2 years ago
- Python bindings to and Jupyter Notebook+Lab integration for the HiGlass viewer☆64Updated 3 weeks ago
- ☆31Updated last year
- Genomic data interpretation and visualization Workshop☆21Updated last month
- A template for standard compliant snakemake-workflows☆119Updated last month
- A bioinformatics API to interface with public multi-omics bio databases for wicked fast data integration.☆36Updated last year
- Issue tracker for the Open Targets Platform☆12Updated 5 months ago
- ☆33Updated 4 years ago