labsyspharm / orion-crc
☆13Updated 9 months ago
Alternatives and similar repositories for orion-crc:
Users that are interested in orion-crc are comparing it to the libraries listed below
- QuPath extension to work with WSInfer - https://wsinfer.readthedocs.io/☆23Updated this week
- Piecewise alignment for layers of mosaics☆23Updated 2 months ago
- ☆16Updated 2 years ago
- Pipeline for computational pathology☆34Updated last year
- Solid Tumor Associative Modeling in Pathology☆58Updated this week
- Data and code to accompany our Nature publication☆44Updated 2 years ago
- Python 3 library for the augmentation & normalization of H&E images☆52Updated 2 years ago
- Re-stained whole slide image alignment☆32Updated last year
- GrandQC tool for tissue detection and quality control in pathology☆24Updated last month
- A Python package for handling histopathology whole-slide images using multiple instance learning (MIL) techniques.☆28Updated 9 months ago
- Whole Slide image (WSI) conversion for brightfield histology images☆34Updated this week
- version 1 scripts for CODA☆41Updated 9 months ago
- 🔬 Code-free deep segmentation for computational pathology☆53Updated 8 months ago
- Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Qu…☆54Updated 2 weeks ago
- ☆22Updated last year
- A Python library for deep learning on whole-slide images☆51Updated 3 years ago
- A neural network software for using Molecular labelling to improve pathological annotation of H and E tissues☆31Updated 3 weeks ago
- Image-translation-assisted segmentation in 3D☆26Updated 2 years ago
- Blazing fast nuclei segmentation for brightfield Whole Slide Images☆34Updated last week
- Quality control of whole-slide images through multi-class semantic segmentation of artifacts☆30Updated last year
- Hands-on Sessions 1 and 2 at the Building Interpretable AI for Digital Pathology AMLD workshop 2021☆21Updated 3 years ago
- ☆40Updated 3 years ago
- A tool for rapidly labeling objects using deep learning feature embedding☆30Updated 6 months ago
- This repository contains the implementation of TILAb-score as described in the original paper.☆18Updated 5 years ago
- First commit☆60Updated 2 years ago
- Package using StarDist and Python that performs object detection and spatial analysis on H&E images☆3Updated 3 months ago
- A vision language model for gigapixel whole slide images in histopathology☆34Updated 4 months ago
- A set of codes to classify H&E slides using deep learning☆29Updated 2 years ago
- 🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images☆66Updated 7 months ago
- An open-source digital pathology based rapid image annotation tool☆75Updated this week