Alternatives and similar repositories for orion-crc

Users that are interested in orion-crc are comparing it to the libraries listed below

• labsyspharm / palom
  Piecewise alignment for layers of mosaics
  ☆29Updated last month
• cpath-ukk / grandqc
  GrandQC tool for tissue detection and quality control in pathology
  ☆61Updated 5 months ago
• choosehappy / PatchSorter
  A tool for rapidly labeling objects using deep learning feature embedding
  ☆33Updated this week
• ashleylk / CODA
  version 1 scripts for CODA
  ☆50Updated last year
• markowetzlab / pathml
  A Python library for deep learning on whole-slide images
  ☆53Updated 3 years ago
• qupath / qupath-extension-wsinfer
  QuPath extension to work with WSInfer - https://wsinfer.readthedocs.io/
  ☆24Updated last month
• huangzhii / IMPRESS
  ☆20Updated 2 years ago
• SBU-BMI / wsinfer
  🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images
  ☆79Updated last year
• tpecot / WholeSlideImageAnalysisWithQuPath
  ☆26Updated 3 months ago
• John-P / wsic
  Whole Slide image (WSI) conversion for brightfield histology images
  ☆36Updated 2 weeks ago
• mahmoodlab / TriPath
  Analysis of 3D pathology samples using weakly supervised AI - Cell
  ☆102Updated 7 months ago
• MathOnco / valis
  Virtual Alignment of pathoLogy Image Series
  ☆172Updated 2 months ago
• kmboehm / orpheus
  ☆14Updated 6 months ago
• nadeemlab / ImPartial
  Interactive deep learning whole-cell segmentation and thresholding using partial annotations
  ☆38Updated 2 months ago
• KerenLab / CellSighter
  ☆34Updated last year
• NHPatterson / wsireg
  multimodal whole slide image registration in a graph structure
  ☆92Updated last year
• AstroPathJHU / AstroPathPipeline
  The AstroPath Pipeline was developed to process whole slide multiplex immunofluorescence data from microscope to database at single cell …
  ☆19Updated 4 months ago
• sebastianffx / stainlib
  Python 3 library for the augmentation & normalization of H&E images
  ☆58Updated 2 years ago
• MaryamHaghighat / PathProfiler
  Pipeline for computational pathology
  ☆38Updated last year
• andreped / NoCodeSeg
  🔬 Code-free deep segmentation for computational pathology
  ☆55Updated last year
• qupath / qupath-extension-instanseg
  The official QuPath extension for InstanSeg
  ☆25Updated this week
• maragraziani / interpretAI_DigiPath
  Hands-on Sessions 1 and 2 at the Building Interpretable AI for Digital Pathology AMLD workshop 2021
  ☆22Updated 4 years ago
• Bayer-Group / paquo
  PAthological QUpath Obsession - QuPath and Python conversations
  ☆121Updated 8 months ago
• ksugar / qupath-extension-sam
  QuPath extension for Segment Anything Model (SAM)
  ☆117Updated last month
• pearcetm / svs-deidentifier
  Strip potentially identifying label and macro images from Aperio SVS whole slide image files
  ☆35Updated last year
• michaellee1 / CellSeg
  ☆23Updated 2 years ago
• cpath-ukk / lung_cancer
  ☆15Updated 7 months ago
• mahmoodlab / MAPS
  Machine learning for Analysis of Proteomics in Spatial biology - Nature Communications
  ☆58Updated last year
• impromptuRong / hd_wsi
  ☆34Updated 5 months ago
• KatherLab / STAMP
  Solid Tumor Associative Modeling in Pathology
  ☆84Updated this week