labsyspharm / orion-crc
☆14Updated last year
Alternatives and similar repositories for orion-crc:
Users that are interested in orion-crc are comparing it to the libraries listed below
- ☆19Updated 2 years ago
- Piecewise alignment for layers of mosaics☆23Updated last week
- GrandQC tool for tissue detection and quality control in pathology☆40Updated last month
- ☆23Updated last year
- version 1 scripts for CODA☆44Updated 11 months ago
- QuPath extension to work with WSInfer - https://wsinfer.readthedocs.io/☆24Updated last week
- The AstroPath Pipeline was developed to process whole slide multiplex immunofluorescence data from microscope to database at single cell …☆18Updated last year
- Data and code to accompany our Nature publication☆45Updated 2 years ago
- TissUUmaps is a browser-based tool for fast visualization and exploration of millions of data points overlaying a tissue sample. TissUUma…☆53Updated 2 months ago
- UNet script, model, sample data☆13Updated 2 months ago
- Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Qu…☆60Updated 2 months ago
- The official QuPath extension for InstanSeg☆16Updated last week
- A Python library for deep learning on whole-slide images☆51Updated 3 years ago
- ☆32Updated last year
- A tool for rapidly labeling objects using deep learning feature embedding☆32Updated 8 months ago
- An Interactive Image Segmentation Filter for Multiplex Microscopy☆30Updated 2 months ago
- ☆25Updated 3 months ago
- Synthetic histology using GANs, for deep learning model explainability and trainee education.☆15Updated last year
- QuPath extension to interactively align images☆23Updated last week
- Strip potentially identifying label and macro images from Aperio SVS whole slide image files☆31Updated 11 months ago
- Pipeline for computational pathology☆34Updated last year
- Hands-on Sessions 1 and 2 at the Building Interpretable AI for Digital Pathology AMLD workshop 2021☆21Updated 3 years ago
- A neural network software for using Molecular labelling to improve pathological annotation of H and E tissues☆31Updated 2 months ago
- Interactive deep learning whole-cell segmentation and thresholding using partial annotations☆39Updated last week
- ☆15Updated last year
- ☆40Updated 2 years ago
- HCC_Deep_learning☆19Updated 4 years ago
- Re-stained whole slide image alignment☆33Updated last year
- Solid Tumor Associative Modeling in Pathology☆72Updated this week
- Machine learning for Analysis of Proteomics in Spatial biology - Nature Communications☆53Updated last year