Alternatives and similar repositories for kmdata

Users that are interested in kmdata are comparing it to the libraries listed below

• MSKCC-Epi-Bio / gnomeR
  Package to wrangle and visualize genomic data in R
  ☆26Updated last month
• karissawhiting / cbioportalR
  R package to wrap cBioPortal's API to pull data from public or private cBioPortal databases
  ☆23Updated last year
• Bioconductor / bioc-run
  Helper script for bioconductor/bioconductor_docker
  ☆13Updated 8 months ago
• imbs-hl / survivalsvm
  Survival Support Vector Analysis
  ☆18Updated 8 months ago
• Shians / BiocExplorer
  ☆11Updated 7 years ago
• laderast / bash_for_dnanexus
  Beginning of a textbook for shell skills for bioinformatics
  ☆11Updated 2 months ago
• neilstats / ckbplotr
  R package for creating plots
  ☆11Updated last week
• lgeistlinger / EnrichmentBrowser
  Seamless navigation through combined results of set-based and network-based enrichment analysis
  ☆21Updated 2 months ago
• htx-r / Reproduce-results-from-papers
  ☆12Updated 10 months ago
• denalitherapeutics / archs4
  An R interface to query and extract data from the ARCHS4 data
  ☆10Updated 7 years ago
• bjcairns / ukbschemas
  Use R to generate a database containing the UK Biobank data schemas from http://biobank.ctsu.ox.ac.uk/crystal/schema.cgi
  ☆20Updated 4 years ago
• cBioPortal / 2020-cbioportal-r-workshop
  Workshop materials for cBioPortal Webinar 5: API & R Client
  ☆19Updated 5 years ago
• hneth / unikn
  Enabling corporate design elements in R (with colors and color-related functions)
  ☆39Updated 2 months ago
• stemangiola / rpharma2020_tidytranscriptomics
  ☆10Updated 5 years ago
• arorarshi / survClust
  An outcome weighted supervised clustering algorithm, designed to classify patients according to their molecular as well as time-event or …
  ☆16Updated last year
• PavlidisLab / markerGeneProfile
  Marker gene profile estimation method used in NeuroExpresso manuscript
  ☆14Updated 6 years ago
• choisy / cutoff
  R package: determining cutoff values from bimodal data
  ☆11Updated last year
• mdozmorov / E-MTAB-3610
  Processed E-MTAB-3610 dataset - Transcriptional Profiling of 1,000 human cancer cell lines
  ☆11Updated 3 years ago
• stemangiola / nanny
  A tidyverse suite for (pre-) machine-learning: cluster, PCA, permute, impute, rotate, redundancy, triangular, smart-subset, abundant and …
  ☆32Updated 2 years ago
• seandavi / BiocPkgTools
  Computable build reports, package metadata, and download stats from the Bioconductor project
  ☆22Updated 3 weeks ago
• PeteHaitch / DelayedMatrixStats
  A port of the matrixStats API to work with DelayedMatrix objects from the DelayedArray package
  ☆15Updated 7 months ago
• ropensci / colocr
  An R package for conducting co-localization analysis. Edit
  ☆25Updated 5 years ago
• alpreyes / GENAVi
  ☆16Updated 5 years ago
• facilebio / FacileAnalysis
  Modular & interactive analysis components for bioinformatics
  ☆18Updated last month
• MaayanLab / geo2enrichr
  A browser extension and web application for extracting gene sets from GEO and piping them to Enrichr.
  ☆14Updated 2 years ago
• gexijin / shinyserver
  Shiny server configuration with Nginx load balancer
  ☆26Updated last year
• hakyimlab / ukbrest
  ukbREST: efficient and streamlined data access for reproducible research of large biobanks
  ☆41Updated 4 years ago
• mdbrown / rmda
  R package to plot decision curves
  ☆28Updated 7 years ago
• timothy-barry / ondisc
  Space- and time-optimal algorithms for large single-cell expression matrices, with a focus on single-cell CRISPR screens.
  ☆11Updated last year
• kevinblighe / RegParallel
  Standard regression functions in R enabled for parallel processing over large data-frames.
  ☆38Updated 2 years ago