loggy01 / alpharingLinks
AlphaRING is a package designed for interpretable, protein structure-based prediction of missense variant deleteriousness.
☆20Updated 2 months ago
Alternatives and similar repositories for alpharing
Users that are interested in alpharing are comparing it to the libraries listed below
Sorting:
- R tool to analyse and integrate multiple -omics data☆14Updated 4 months ago
- ☆19Updated last month
- Comparison of Adaptive Immune Receptor Repertoires☆28Updated 8 months ago
- Examples for gget (https://github.com/pachterlab/gget).☆38Updated 3 weeks ago
- Phylogenetic pathway–dependent recognition of fixed substitutions and parallel mutations☆11Updated 3 weeks ago
- BioInformatics Agent (BIA): Unleashing the Power of Large Language Models to Reshape Bioinformatics Workflow☆38Updated last year
- A network based gene classification library to generate genome wide predictions about genes that are functionally similar to the input ge…☆20Updated this week
- Network Visualization using both GUI and Programming☆29Updated 4 months ago
- Chromatin ACcessibility and Transcriptomics Unifying Software☆17Updated 11 months ago
- phylogenetic analyses informed by deep mutational scanning data☆15Updated last year
- Code from "Deep Learning Of The Regulatory Grammar Of Yeast 5′ Untranslated Regions From 500,000 Random Sequences"☆15Updated 8 years ago
- Bayesian enrichment estimation in R☆11Updated 3 years ago
- Refining the impact of genetic evidence on clinical success☆26Updated last year
- Software to process, statistically analyse and visualise deep mutational scanning data☆14Updated 3 weeks ago
- ☆19Updated 2 years ago
- Analysis tools for PhIP-seq experiments☆12Updated 3 years ago
- Flexible analysis of high-content CRISPR screening☆30Updated last month
- programs and scripts, mainly python, for analyses related to nucleic or protein sequences☆24Updated 2 months ago
- Repository for the paper "The impact of package selection and versioning on single-cell RNA-seq analysis"☆20Updated 8 months ago
- A Bio2BEL package for integrating pathway-related information from KEGG in BEL☆13Updated 3 years ago
- CoV-Seq: COVID-19 Genomic Sequence Database and Visualization☆15Updated 5 years ago
- Listing of GPU based bioinformatics software & sites & publications☆10Updated 3 years ago
- Template for building your own portfolio☆24Updated 3 months ago
- Deep learning based prediction of IsoForm FUnctions from Sequences and Expression☆15Updated 2 months ago
- Annotation of mutated peptide sequences with published or novel potential neoantigen descriptors☆33Updated 6 months ago
- Code repository for the manuscript: Nucleotide dependency analysis of DNA language models reveals genomic functional elements☆16Updated 6 months ago
- A Nextflow pipeline to align, merge, and organize large PhIP-Seq datasets☆13Updated 8 months ago
- Collection of tools to retrieve siRNA (small interfering RNA) candidate sequences targeting your gene of interest from popular siRNA desi…☆11Updated 2 years ago
- A package for designing activity-informed nucleic acid diagnostics for viruses.☆34Updated 2 years ago
- supplementary tables and files☆10Updated last year