GuiltyTargets / guiltytargets

Related projects ⓘ

Alternatives and complementary repositories for guiltytargets

• kundajelab / coessentiality
  Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)
  ☆27Updated 2 years ago
• pathwayforte / pathway-forte
  A Python package for benchmarking pathway database with functional enrichment and classification methods
  ☆13Updated 3 years ago
• CancerRxGene / gdsctools
  Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )
  ☆34Updated 2 years ago
• opentargets / genetics-gold-standards
  GWAS gold standards repository
  ☆29Updated last year
• CancerRxGene / gdscIC50
  An R package to fit dose response curves for data from the Genomics of Drug Sensitivity of Cancer (GDSC) project.
  ☆24Updated last year
• bio2bel / bio2bel
  A Python framework for integrating biological databases and structured data sources in Biological Expression Language (BEL)
  ☆21Updated 3 years ago
• AbbVie-ComputationalGenomics / genetic-evidence-approval
  ☆24Updated 3 years ago
• krassowski / drug-disease-profile-matching
  Multi-omics disease sub-type specific drug repositioning aided with expression signatures from ConnectivityMap
  ☆16Updated 4 years ago
• BaderLab / netDx
  R package with netDx software and data for examples
  ☆12Updated last year
• opentargets / genetics-finemapping
  Fine-mapping pipeline for Open Targets Genetics
  ☆25Updated 2 years ago
• enricoferrero / TargetPred
  In Silico Prediction of Novel Therapeutic Targets Using Gene – Disease Association Data
  ☆17Updated 6 years ago
• Ensembl / postgap
  Linking GWAS studies to genes through cis-regulatory datasets
  ☆39Updated last year
• gmiaslab / pyiomica
  PyIOmica (pyiomica) is a Python package for omics analyses.
  ☆15Updated 2 years ago
• PathwayMerger / PathMe
  Harmonizing pathway databases using Biological Expression Language (BEL)
  ☆19Updated 4 months ago
• Shamir-Lab / NEMO
  ☆15Updated 4 years ago
• matsengrp / sumrep
  Summary statistics for repertoires
  ☆16Updated last year
• dhimmel / integrate
  Scripts and resources to create Hetionet v1.0, a heterogeneous network for drug repurposing
  ☆31Updated 7 years ago
• krishnanlab / txt2onto
  Code for classifying unstructured text to tissue ontology terms using natural language processing and machine learning.
  ☆23Updated 3 months ago
• de-Boer-Lab / MAUDE
  Mean Alterations Using Discrete Expression
  ☆13Updated 7 months ago
• Shamir-Lab / DOMINO
  Network-based module discovery algorithm with high rate of empirically-validated term calls
  ☆9Updated last year
• alberto-valdeolivas / RandomWalkRestartMH
  A package to perform Random Walk with Restart on different types of networks
  ☆19Updated last year
• opentargets / gentropy
  Open Targets python framework for post-GWAS analysis
  ☆33Updated this week
• NCIP / pathway-interaction-database
  The Pathway Interaction Database (PID) is software supporting the access and display of information about bio-molecular interactions and …
  ☆15Updated 8 years ago
• stracquadaniolab / pygna
  A Python package for gene network analysis
  ☆32Updated 2 years ago
• yanailab / moana
  Moana: Robust cell type classification of single-cell RNA-Seq data
  ☆22Updated 6 years ago
• greenelab / multi-plier
  An unsupervised transfer learning approach for rare disease transcriptomics
  ☆44Updated 4 years ago
• sigven / oncoEnrichR
  Explore the cancer relevance of your gene list
  ☆49Updated 2 months ago
• epaull / TieDIE
  Tied Diffusion for Subnetwork Discovery (TieDIE)
  ☆37Updated 2 years ago
• cssblab / iOmicsPASS
  Data Integration tool utilizing network information for predictive analyses
  ☆16Updated last year
• hammerlab / t-cell-relation-extraction
  Literature mining for T cell relations
  ☆23Updated 2 years ago