rebuilds and completes models of protein complexes using AlphaFold2
☆20Sep 1, 2026Updated 2 months ago
Alternatives and similar repositories for gapTrick
Users that are interested in gapTrick are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆53Sep 25, 2024Updated 2 years ago
- ☆18May 11, 2026Updated 5 months ago
- A python implementation of open-source packages to explore the chemical reaction space associated with elementary prebiotic chemistry.☆12Sep 6, 2026Updated last month
- ☆24Oct 1, 2026Updated last month
- AlphaJudge is a pipeline that evaluates AlphaFold-predicted protein complexes by combining AI-derived confidence metrics (ipTM, pDockQ, P…☆15Oct 20, 2026Updated last week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆41Mar 25, 2026Updated 7 months ago
- CIF (Crystallographic Information File) support for Visual Studio Code.☆13Nov 16, 2025Updated 11 months ago
- HInt (Homologous Interactions)☆10Updated this week
- ☆12Aug 20, 2026Updated 2 months ago
- A tool for protein and protein complex structure prediction.☆30Jun 13, 2025Updated last year
- Protein common interface databases☆10Apr 13, 2019Updated 7 years ago
- ☆14Mar 15, 2025Updated last year
- ☆16Apr 3, 2025Updated last year
- Source code for The Protein Design Archive web application.☆10Updated this week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆16Feb 13, 2026Updated 8 months ago
- parKVFinder: thread-level parallel KVFinder☆16May 9, 2025Updated last year
- A collection of molecular modelling tools for UCSF Chimera☆18Mar 26, 2019Updated 7 years ago
- ☆17Oct 3, 2023Updated 3 years ago
- ☆14Oct 29, 2024Updated 2 years ago
- Files and utilities for protein-emoji☆26Nov 4, 2022Updated 3 years ago
- A Motif Hash Based Method for Matching Crosslinkers into Peptides and Proteins☆24Jan 25, 2024Updated 2 years ago
- Tool for reconstruction and analysis of continuous heterogeneity of a cryo-EM dataset☆34Sep 18, 2025Updated last year
- Code, intermediate results and an interactive visualisation on prediction of putative novel enzymes and small molecule binding proteins p…☆28Aug 9, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- symdesign source☆11Jul 4, 2024Updated 2 years ago
- Self-supervised method for disentanglement, clustering and classification of objects in multidimensional image data☆17Updated this week
- Source code and examples for AlphaFold Unmasked☆79Jun 23, 2026Updated 4 months ago
- Decoding the functional networks of non-model organisms☆13Aug 12, 2026Updated 2 months ago
- From cryo-EM density map to atomic structure☆31Aug 17, 2025Updated last year
- Colorblind-friendly, perceptually uniform palettes for chimerax☆14Sep 26, 2020Updated 6 years ago
- Cython bindings and Python interface to Jess, a 3D template matching software for protein structures. Now 10x faster!☆12Aug 25, 2026Updated 2 months ago
- ☆25Sep 22, 2026Updated last month
- Explicit crosslinks in AlphaFold 3☆23Mar 17, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- An open-source prediction framework for peptide ion collision cross section (CCS) values with python.☆16Oct 6, 2023Updated 3 years ago
- Repository for "Nearest neighbor search on embeddings rapidly identifies distant protein relations"☆13Apr 2, 2023Updated 3 years ago
- Command-line tools for protein structure analysis: convert PDB, mmCIF, PDBML, or XYZR files into atomic sphere data, then compute volumes…☆16Jul 25, 2026Updated 3 months ago
- AF2chi implementation code for localColabFold☆10Oct 8, 2026Updated 3 weeks ago
- Heuristic energy-based cyclic peptide design☆17Feb 21, 2025Updated last year
- Biomedical data, from lab to paper.☆20Updated this week
- a lightweight distogram-prediction model trained via contrastive learning☆16May 3, 2026Updated 6 months ago