☆23Mar 15, 2024Updated 2 years ago
Alternatives and similar repositories for ContraNovo
Users that are interested in ContraNovo are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Collection of peptide de novo sequencing algorithms by BEAM labs☆30Updated this week
- ☆14Jan 7, 2026Updated 4 months ago
- ☆44Feb 27, 2026Updated 3 months ago
- FoldBench is a low-homology benchmark spanning proteins, nucleic acids, ligands, and six major interaction types, enabling assessments th…☆124May 9, 2026Updated 2 weeks ago
- Spectral library searching using approximate nearest neighbor techniques.☆49Feb 11, 2026Updated 3 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A diaPASEF spectrum-centric analysis tool☆14Mar 23, 2026Updated 2 months ago
- A deep learning toolkit for mass spectrometry☆91Jan 7, 2026Updated 4 months ago
- ☆23May 11, 2026Updated 2 weeks ago
- The state of the art Deep CNN neural network for de novo sequencing of tandem mass spectra☆40Oct 30, 2024Updated last year
- Paper list of agent for science☆257Mar 12, 2026Updated 2 months ago
- CLI toolkit for fast analysis of DIA proteomics experiments and in silico library prediction☆21Updated this week
- Post-processing peptide de novo sequences to improve their accuracy☆10Nov 29, 2022Updated 3 years ago
- [NeurIPS 2024] BEACON: Benchmark for Comprehensive RNA Tasks and Language Models☆62Aug 2, 2024Updated last year
- ☆40May 13, 2026Updated 2 weeks ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Pan-cancer quantification of neoantigen-mediated immunoediting in cancer evolution☆14May 4, 2022Updated 4 years ago
- Pipeline for de novo peptide sequencing (Novor, DeepNovo, SMSNet, PointNovo, Casanovo) and assembly with ALPS.☆45Feb 23, 2024Updated 2 years ago
- ☆15Feb 13, 2023Updated 3 years ago
- Official PyTorch implementation of "Evolving Search Space for Neural Architecture Search"☆12Aug 18, 2021Updated 4 years ago
- De novo peptide sequencing with InstaNovo: Accurate, database-free peptide identification for large scale proteomics experiments☆119Apr 10, 2026Updated last month
- Implementation of UniSpec, a deep learning model for predicting full fragment ion peptide spectra.☆12Feb 11, 2025Updated last year
- A Emacs major mode for editing Caddy configuration files.☆19Jun 26, 2022Updated 3 years ago
- De Novo Mass Spectrometry Peptide Sequencing with a Transformer Model☆187Updated this week
- A simple tool to help you manually discover the depths of your (complex) spectra, one spectrum at a time.☆38May 20, 2026Updated last week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A Rust library for peptide centric mass spec calculations centered around PSI standards and handling complex cases robustly☆48May 22, 2026Updated last week
- ☆14Sep 3, 2024Updated last year
- Graphical user interface for de novo sequencing of tandem mass spectra☆15Mar 11, 2024Updated 2 years ago
- This repository attempts to implement a neural net that leverages the transformer architecture to predict peptide properties (retention t…☆11Nov 22, 2024Updated last year
- Official PyTorch implementation of Fast-MoCo☆16Feb 20, 2023Updated 3 years ago
- OriGene: A Self-Evolving Virtual Disease Biologist for Mechanism-Guided Therapeutic Target Discovery☆212Feb 24, 2026Updated 3 months ago
- PSI-MOD ontology for modified and unmodified amino acid residues☆16Updated this week
- Benchmark for Data-Efficient Image Classification☆25Apr 11, 2023Updated 3 years ago
- ☆41Jan 21, 2026Updated 4 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A high level tensorflow lib which can convert defined tf model to caffe and other engine☆24Jul 8, 2018Updated 7 years ago
- PointSite: a point cloud segmentation tool for identification of protein ligand binding atoms☆58Mar 9, 2023Updated 3 years ago
- ☆19Jul 30, 2021Updated 4 years ago
- Estimation of false discovery proportion for mass spectrometry proteomics data using entrapment☆31May 20, 2026Updated last week
- ☆11Apr 12, 2022Updated 4 years ago
- Material for the 2017 May Institute☆13Jun 25, 2017Updated 8 years ago
- A simple wrapper for lmdb. Support dict-like operations.☆23Apr 20, 2023Updated 3 years ago