GerNA-Bind: Geometric-enhanced RNA-ligand Binding Specificity Prediction with Deep Learning
☆27Dec 15, 2025Updated 4 months ago
Alternatives and similar repositories for GerNA-Bind
Users that are interested in GerNA-Bind are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The official source code for "3D Interaction Geometric Pre-training for Molecular Relational Learning"☆23Sep 30, 2025Updated 6 months ago
- ☆35Feb 24, 2026Updated last month
- Map query sequences to the assemblies of all pre-June 2023 bacteria (https://ftp.ebi.ac.uk/pub/databases/AllTheBacteria/Releases/0.2/) on…☆12May 22, 2024Updated last year
- Formats Roary output for viewing in FriPan☆11May 23, 2018Updated 7 years ago
- A list of awesome bioinformatics communities☆22Oct 3, 2024Updated last year
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- tool to determine optimal refrerence genome given a set of fasta files☆15May 18, 2023Updated 2 years ago
- GPT-based protein language model for PTM site prediction☆19Aug 11, 2024Updated last year
- ☆43Oct 1, 2023Updated 2 years ago
- ☆18Jan 19, 2026Updated 2 months ago
- [IJCV] Progressive Visual Prompt Learning with Contrastive Feature Re-formation☆15Aug 10, 2024Updated last year
- Fork of the KaKs_Calculator2.0 project https://sourceforge.net/projects/kakscalculator2☆14May 18, 2023Updated 2 years ago
- An analysis of a new experimentally-derived nucleic acid binding chemical library☆28Jan 27, 2023Updated 3 years ago
- ☆56Dec 5, 2024Updated last year
- ☆41Jan 21, 2026Updated 2 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- The GAN model for designing AMP☆17Aug 19, 2025Updated 7 months ago
- ☆21Mar 20, 2025Updated last year
- ☆10Mar 11, 2025Updated last year
- [ECCV 2024] ZeroI2V: Zero-Cost Adaptation of Pre-trained Transformers from Image to Video☆23Jul 29, 2024Updated last year
- Tools to process OrthoFinder output: Calculate the most common gene name of an orthogroup by majority vote and create plots analogous to …☆20Jan 14, 2026Updated 3 months ago
- HMmer Based UndeRstandinG of gene clustERs☆15Feb 6, 2026Updated 2 months ago
- Official implementation of CP-Composer. It is the released code of 《Zero-Shot Cyclic Peptide Design via Composable Geometric Constraints》…☆23Aug 6, 2025Updated 8 months ago
- Easy & Pretrained SOTA Deep Learning for RNA strings☆12Apr 15, 2022Updated 4 years ago
- ☆27Aug 29, 2025Updated 7 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Deep learning in genomics☆20Jan 26, 2019Updated 7 years ago
- Official code repo for NeurIPS 2025 Spotlight paper, "Debate or Vote: Which Yields Better Decisions in Multi-Agent LLMs?"☆71Oct 15, 2025Updated 6 months ago
- Pathway Tools multiprocessing wrapper (for PathoLogic).☆15Dec 18, 2025Updated 3 months ago
- A unified cross-attention model for predicting antigen binding specificity to both HLA and TCR molecules☆13Jul 9, 2025Updated 9 months ago
- Wrapper script to concatenate, align, and construct phylogenetic trees of BUSCOs☆20Sep 18, 2019Updated 6 years ago
- ☆22Apr 20, 2025Updated 11 months ago
- Demo plugin for PyMOL with PyQt☆12Jun 14, 2019Updated 6 years ago
- Windows下模拟MacOS快捷键☆11Oct 19, 2023Updated 2 years ago
- Fragment Graphical Variational AutoEncoding for Screening and Generating Molecules☆14Nov 21, 2022Updated 3 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- ☆15Jun 29, 2015Updated 10 years ago
- Miscellaneous Perl scripts from 20 years in microbial bioinformatics☆18Jul 16, 2024Updated last year
- A geometric foundation model for enzyme retrieval with evolutionary insights.☆85Mar 24, 2026Updated 3 weeks ago
- fastest GTF/GFF-to-BED converter chilling around☆32Mar 19, 2026Updated 3 weeks ago
- ☆11Jun 4, 2021Updated 4 years ago
- A tool for the analysis of pathways sampled in molecular dynamics simulations based on Self-Organizing Maps (SOM)☆10Jan 26, 2022Updated 4 years ago
- ☆28Sep 28, 2024Updated last year