workflow4metabolomics / tools-metabolomicsLinks
Galaxy tools for metabolomics maintained by Workflow4Metabolomics
☆30Updated 2 months ago
Alternatives and similar repositories for tools-metabolomics
Users that are interested in tools-metabolomics are comparing it to the libraries listed below
Sorting:
- Metabolomics Tools for Galaxy☆21Updated 9 years ago
- The Proteomics sample metadata: Standard for experimental design annotation in proteomics datasets☆98Updated 2 months ago
- MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters☆27Updated 7 years ago
- pathway and network analysis for metabolomics☆43Updated this week
- ☆37Updated this week
- ☆55Updated 4 years ago
- ☆66Updated last year
- mzTab Reporting MS-based Proteomics and Metabolomics Results☆43Updated 8 months ago
- ☆17Updated last year
- Identify and quantify MHC eluted peptides from mass spectrometry raw data☆41Updated 3 weeks ago
- Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.☆24Updated 6 months ago
- Galaxy Tool Shed repositories maintained and developed by the GalaxyP community☆35Updated 3 weeks ago
- R package for optimized LC-MS spectra processing☆26Updated last week
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆64Updated last week
- MS-GF+ (aka MSGF+ or MSGFPlus) performs peptide identification by scoring MS/MS spectra against peptides derived from a protein sequence …☆81Updated last month
- Using R and Bioconductor packages for the analysis and comprehension of proteomics data.☆99Updated 3 months ago
- Picotti lab data analysis package.☆64Updated 7 months ago
- GREIN : GEO RNA-seq Experiments Interactive Navigator☆50Updated 6 years ago
- GraphBio: a shiny web app to easily perform popular visualization analysis for omics data☆33Updated 2 years ago
- A BioJS viewer for protein sequence features☆51Updated 3 years ago
- A modest Feature Finder (moFF) to extract MS1 intensities from Thermo raw file☆33Updated 4 years ago
- Galaxy Tool wrappers☆122Updated last week
- Differential Expression Analysis tool box R lang package for omics data☆46Updated last month
- Absolute quantification package based on quantms.io☆16Updated 2 months ago
- A global network optimization approach for untargeted LC-MS metabolomics data annotation and metabolite discovery☆50Updated 2 years ago
- Untargeted metabolomics workflow for large-scale data processing and analysis implemented in Snakemake☆30Updated 11 months ago
- Chemical Similarity Enrichment analysis of metabolomics datasets☆30Updated last year
- The pmartR R package provides functionality for quality control, normalization, exploratory data analysis, and statistical analysis of ma…☆48Updated last month
- This is the git repository matching the Bioconductor package mzR: parser for netCDF, mzXML, mzData and mzML files (mass spectrometry data…☆46Updated 2 weeks ago
- R package - MSstats☆88Updated last month