Alternatives and similar repositories for Biojs.Annotator:

Users that are interested in Biojs.Annotator are comparing it to the libraries listed below

• greenelab / pubtator
  Retrieve and process PubTator annotations
  ☆44Updated last year
• 2mh / PyBioC
  Python library for work with BioCreative files
  ☆13Updated 7 years ago
• ncbi-nlp / BioC-JSON
  Tool that converts between BioC XML files and BioC JSON files
  ☆16Updated 8 years ago
• bionlplab / bioc
  Data structures and code to read/write BioC XML and Json.
  ☆32Updated last year
• biolink / biolink-model-toolkit
  A collection of useful python functions for looking up information and working with the Biolink Model
  ☆24Updated 2 months ago
• OntoGene / OGER
  ☆24Updated 4 years ago
• DiseaseOntology / SymptomOntology
  The symptom ontology was designed around the guiding concept of a symptom being: “A perceived change in function, sensation or appearance…
  ☆41Updated 11 months ago
• jakelever / pubrunner
  A framework for keeping biomedical text mining result up-to-date
  ☆42Updated 4 years ago
• gyorilab / gilda
  Grounding of biomedical named entities with contextual disambiguation
  ☆43Updated last month
• dhimmel / clintrials
  Cataloging pharmacotherapies in clinical trial from ClinicalTrials.gov
  ☆27Updated 8 years ago
• biopragmatics / biomappings
  🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from prima…
  ☆53Updated last week
• larsjuhljensen / tagger
  ☆22Updated 2 years ago
• gyorilab / indra_db
  A Database-based knowledge back-end built on and for INDRA. The INDRA Database is a service that can be set up by any user with their own…
  ☆16Updated 2 weeks ago
• dermatologist / ckblib
  Tools to create a clinical knowledge graph from biomedical literature. Includes wrappers for NCBI Eutils, cTakes annotator and Neo4J
  ☆16Updated 10 months ago
• KerstenDoering / PubMedPortable
  PubMedPortable automatically builds a PostgreSQL relational database schema and a Xapian full text index on PubMed XML files as well as i…
  ☆26Updated 6 years ago
• biopragmatics / pyobo
  📛 A Python package for using ontologies, terminologies, and biomedical nomenclatures
  ☆66Updated last week
• Knowledge-Graph-Hub / kg-covid-19
  An instance of KG Hub to produce a knowledge graph for COVID-19 response.
  ☆81Updated last year
• INCATools / ubergraph
  Integrated OBO ontology store
  ☆45Updated 2 months ago
• ncbi / BioConceptVec
  ☆41Updated 5 years ago
• geneontology / noctua
  Graph-based modeling environment for biology, including prototype editor and services
  ☆39Updated last year
• jakelever / biotext
  Get a nicely-chunked local copy of the biomedical literature (to use for other projects)!
  ☆14Updated 10 months ago
• SmartDataAnalytics / BioKEEN
  A computational library for learning and evaluating biological knowledge graph embeddings - please see the main PyKEEN repo at https://gi…
  ☆45Updated 2 years ago
• cambridgeltl / nn_for_LBD
  Repository for paper 'Neural networks for open and closed Literature-based Discovery'
  ☆9Updated 4 years ago
• jamesaoverton / obo-tutorial
  A tutorial on using Open Biological and Biomedical Ontologies (OBO)
  ☆58Updated 6 years ago
• LHNCBC / SemRep
  ☆67Updated 2 years ago
• xMAnton / BioGrakn
  A Knowledge Graph-based Semantic Database for Biomedical Sciences
  ☆28Updated 6 years ago
• ga4gh / phenopacket-tools
  An app and library for building, conversion, and validation of GA4GH Phenopackets.
  ☆13Updated last week
• sorgerlab / famplex
  Resources for grounding protein families and complexes from text and describing their hierarchical relationships.
  ☆18Updated 9 months ago
• ncbi-nlp / TeamTat
  Text annotation tool for team collaboration
  ☆41Updated last year
• cthoyt / doctoral-thesis
  📖 Generation and Applications of Knowledge Graphs in Systems and Networks Biology
  ☆29Updated 5 years ago