Alternatives and similar repositories for Biojs.Annotator:

Users that are interested in Biojs.Annotator are comparing it to the libraries listed below

• biolink / biolink-model-toolkit
  A collection of useful python functions for looking up information and working with the Biolink Model
  ☆23Updated last month
• ncbi-nlp / BioC-JSON
  Tool that converts between BioC XML files and BioC JSON files
  ☆16Updated 8 years ago
• greenelab / pubtator
  Retrieve and process PubTator annotations
  ☆44Updated last year
• OntoGene / OGER
  ☆24Updated 4 years ago
• 2mh / PyBioC
  Python library for work with BioCreative files
  ☆13Updated 7 years ago
• ncbi-nlp / ezTag
  Web interface that allows users to perform computer-assisted text annotation
  ☆16Updated 2 years ago
• OntoGene / PyBioC
  Python library for working with BioC files
  ☆13Updated 7 years ago
• INCATools / ubergraph
  Integrated OBO ontology store
  ☆44Updated last month
• gyorilab / gilda
  Grounding of biomedical named entities with contextual disambiguation
  ☆43Updated 3 weeks ago
• CogStack / nlp2phenome
  using AI model to infer patient phenotypes from identified named entities (instances of biomedical concepts)
  ☆10Updated 2 years ago
• luozhhub / pyMeSHSim
  a module to calculate the MeSH similarity
  ☆24Updated 3 years ago
• sorgerlab / famplex
  Resources for grounding protein families and complexes from text and describing their hierarchical relationships.
  ☆18Updated 9 months ago
• larsjuhljensen / tagger
  ☆22Updated 2 years ago
• bionlplab / bioc
  Data structures and code to read/write BioC XML and Json.
  ☆32Updated last year
• EBISPOT / OXO
  Ontology cross-reference and mapping service
  ☆18Updated 9 months ago
• gyorilab / indra_db
  A Database-based knowledge back-end built on and for INDRA. The INDRA Database is a service that can be set up by any user with their own…
  ☆16Updated this week
• cambridgeltl / nn_for_LBD
  Repository for paper 'Neural networks for open and closed Literature-based Discovery'
  ☆9Updated 4 years ago
• jakelever / biotext
  Get a nicely-chunked local copy of the biomedical literature (to use for other projects)!
  ☆14Updated 10 months ago
• biopragmatics / biomappings
  🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from prima…
  ☆52Updated 3 weeks ago
• jakelever / pgxmine
  Text mining for pharmacogenomic associations for PharmGKB
  ☆26Updated 2 years ago
• ccb-hms / ontology-mapper
  a tool for mapping free-text descriptions of entities to ontology terms
  ☆19Updated 8 months ago
• jakelever / pubrunner
  A framework for keeping biomedical text mining result up-to-date
  ☆42Updated 4 years ago
• SmartDataAnalytics / BioKEEN
  A computational library for learning and evaluating biological knowledge graph embeddings - please see the main PyKEEN repo at https://gi…
  ☆45Updated 2 years ago
• chenzxlabhzau / pyMeSHSim
  a module to calculate the MeSH similarity
  ☆26Updated 4 years ago
• opentargets / OnToma
  Map your disease and phenotype terms to the Open Targets platform ontology
  ☆21Updated 4 months ago
• cthoyt / doctoral-thesis
  📖 Generation and Applications of Knowledge Graphs in Systems and Networks Biology
  ☆29Updated 5 years ago
• monarch-initiative / phenol
  phenol: Phenotype ontology library
  ☆23Updated last month
• geneontology / obographs
  Basic and Advanced OBO Graphs: specification and reference implementation
  ☆64Updated 3 months ago
• OBOFoundry / COB
  An experimental ontology containing key terms from Open Biological and Biomedical Ontologies (OBO)
  ☆41Updated last month
• drlivingston / kabob
  KaBOB (Knowledge Base Of Biomedicine)
  ☆10Updated 6 years ago