EuropePMC / Biojs.Annotator
Javascript based component for highlighting text-mined annotations of different semantic types in a full text article identified by a PMCID
☆11Updated 8 years ago
Alternatives and similar repositories for Biojs.Annotator:
Users that are interested in Biojs.Annotator are comparing it to the libraries listed below
- Retrieve and process PubTator annotations☆43Updated last year
- Tool that converts between BioC XML files and BioC JSON files☆16Updated 8 years ago
- Python library for work with BioCreative files☆13Updated 6 years ago
- Data structures and code to read/write BioC XML and Json.☆31Updated last year
- ☆24Updated 4 years ago
- A collection of useful python functions for looking up information and working with the Biolink Model☆21Updated 5 months ago
- PubMedPortable automatically builds a PostgreSQL relational database schema and a Xapian full text index on PubMed XML files as well as i…☆25Updated 6 years ago
- Grounding of biomedical named entities with contextual disambiguation☆39Updated 2 months ago
- Python library for working with BioC files☆13Updated 6 years ago
- Get a nicely-chunked local copy of the biomedical literature (to use for other projects)!☆13Updated 7 months ago
- a module to calculate the MeSH similarity☆24Updated 3 years ago
- A framework for keeping biomedical text mining result up-to-date☆41Updated 4 years ago
- A computational library for learning and evaluating biological knowledge graph embeddings - please see the main PyKEEN repo at https://gi…☆45Updated 2 years ago
- ☆22Updated last year
- Repository for paper 'Neural networks for open and closed Literature-based Discovery'☆9Updated 4 years ago
- A tutorial on using Open Biological and Biomedical Ontologies (OBO)☆56Updated 5 years ago
- Resources for grounding protein families and complexes from text and describing their hierarchical relationships.☆18Updated 6 months ago
- A near real-time named-entity recognizer☆59Updated 7 months ago
- An experimental ontology containing key terms from Open Biological and Biomedical Ontologies (OBO)☆39Updated last month
- Text annotation tool for team collaboration☆40Updated last year
- Machine-learning based pipeline relying on LambdaMART currently used in PubMed for relevance (Best Match) searches☆40Updated 6 years ago
- Integrated OBO ontology store☆44Updated 2 months ago
- Web interface that allows users to perform computer-assisted text annotation☆16Updated last year
- Generating graph structures from OWL ontologies☆12Updated 7 years ago
- Public release of the DeepPhe analytic software☆30Updated last year
- using AI model to infer patient phenotypes from identified named entities (instances of biomedical concepts)☆10Updated 2 years ago
- ☆64Updated 2 years ago
- Map your disease and phenotype terms to the Open Targets platform ontology☆21Updated last month
- a module to calculate the MeSH similarity☆25Updated 3 years ago
- Computing term cooccurrence in MEDLINE☆17Updated 3 years ago