biolink / ontobioLinks
python library for working with ontologies and ontology associations
☆133Updated 11 months ago
Alternatives and similar repositories for ontobio
Users that are interested in ontobio are comparing it to the libraries listed below
Sorting:
- KGX is a Python library for exchanging Knowledge Graphs☆138Updated last week
- RO is an ontology of relations for use with biological ontologies☆106Updated last month
- The Ontology for Biomedical Investigations☆99Updated this week
- Evidence & Conclusion Ontology development site: Use ISSUES to request terms. See WIKI for how to request terms. See README for how to c…☆51Updated this week
- Schema and generated objects for biolink data model and upper ontology☆220Updated this week
- Integrated OBO ontology store☆48Updated 3 months ago
- Ontology Access Kit: A python library and command line application for working with ontologies☆156Updated 7 months ago
- The EMBL-EBI Ontology Lookup Service (OLS)☆76Updated this week
- An instance of KG Hub to produce a knowledge graph for COVID-19 response.☆82Updated 2 years ago
- OBO Organized Knowledge: Training materials for becoming an OBO engineer☆115Updated this week
- Ontology for representing scientific evidence and provenance information☆51Updated 3 months ago
- A system for managing OBO PURLs☆87Updated this week
- Metadata and website for the Open Bio Ontologies Foundry Ontology Registry☆187Updated last week
- An experimental ontology containing key terms from Open Biological and Biomedical Ontologies (OBO)☆45Updated last week
- A tutorial on using Open Biological and Biomedical Ontologies (OBO)☆62Updated 6 years ago
- The Unified Phenotype Ontology (uPheno) integrates multiple phenotype ontologies into a unified cross-species phenotype ontology.☆82Updated this week
- PATO - the Phenotype And Trait Ontology☆59Updated last week
- An ontology of gross anatomy covering metazoa. Works in concert with https://github.com/obophenotype/cell-ontology☆147Updated this week
- Ontology Lookup Service from SPOT at EBI☆95Updated 2 years ago
- Neuro Behaviour Ontology: an ontology for human and animal behaviour processes and behaviour phenotypes☆26Updated last week
- Basic and Advanced OBO Graphs: specification and reference implementation☆68Updated 2 months ago
- DEPRECATED: replaced by linkml☆24Updated 4 years ago
- OWLTools☆116Updated last year
- A Python frontend to (Open Biomedical) Ontologies.☆250Updated last week
- 📛 A Python package for using ontologies, terminologies, and biomedical nomenclatures☆74Updated last week
- Python toolkit for SSSOM mapping format☆60Updated 2 weeks ago
- A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhub☆32Updated last year
- 🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from prima…☆57Updated 3 weeks ago
- Modular environmental exposures ontology☆35Updated 7 months ago
- Data Ingestion Pipeline for Monarch☆57Updated 3 years ago