NetworkX-based Python library for representing ontologies
☆95Jul 12, 2023Updated 2 years ago
Alternatives and similar repositories for nxontology
Users that are interested in nxontology are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Grounding of biomedical named entities with contextual disambiguation☆51Mar 30, 2026Updated last month
- Ontology Access Kit: A python library and command line application for working with ontologies☆165Apr 13, 2026Updated 3 weeks ago
- Extension of LinkML runtime for converting instances of LinkML classes to OWL (classes or instances)☆21Mar 23, 2026Updated last month
- Semantic prefix map registry☆14Feb 20, 2026Updated 2 months ago
- A Python frontend to (Open Biomedical) Ontologies.☆260Jan 13, 2026Updated 3 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- First pass at a thin wrapper around the Monarch API and ChatGPT plugin☆12Mar 21, 2025Updated last year
- 👜 Easily pick a place to store data for your Python code.☆42Apr 24, 2026Updated 2 weeks ago
- Faultless AST for Open Biomedical Ontologies in Python.☆32Feb 2, 2026Updated 3 months ago
- Ten quick tips to finish that manuscript that's 90% complete.☆13Mar 30, 2022Updated 4 years ago
- 🪝 What's the latest version for each database?☆29Updated this week
- OntoMerger is an ontology alignment library for deduplicating knowledge graph nodes that represent the same domain.☆102Jan 11, 2024Updated 2 years ago
- OBO-formatted ontologies → networkx (Python 3)☆151Mar 26, 2025Updated last year
- The Unified Phenotype Ontology (uPheno) integrates multiple phenotype ontologies into a unified cross-species phenotype ontology.☆86Apr 7, 2026Updated last month
- Data ingest application for Monarch Initiative knowledge graph using Koza☆24Updated this week
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- OBO Organized Knowledge: Training materials for becoming an OBO engineer☆120Apr 28, 2026Updated last week
- Python toolkit for SSSOM mapping format☆62Updated this week
- Mondo Disease Ontology☆300May 2, 2026Updated last week
- SQL and SQLite builds of OWL ontologies☆60Mar 30, 2026Updated last month
- An ontology of core ecological entities☆16Dec 14, 2023Updated 2 years ago
- Simple Standard for Sharing Ontology Mappings☆197Apr 29, 2026Updated last week
- Schema and generated objects for biolink data model and upper ontology☆235Apr 29, 2026Updated last week
- Repo to organise the mouse-human phenotype mapping initiative and reconcile resources.☆14Apr 27, 2026Updated last week
- ☆132Feb 2, 2023Updated 3 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- PyBioPAX: A python implementation of the BioPAX object model☆27May 10, 2024Updated last year
- Registry of schemas that use LinkML☆16Updated this week
- A library for Web Ontology Language in Python created using a bridge from horned-owl to python using PyO3.☆23Feb 11, 2026Updated 2 months ago
- ☆193Jan 30, 2023Updated 3 years ago
- 🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from prima…☆62May 2, 2026Updated last week
- Structure your data in a FAIR way using google sheets or TSVs. These are then converted to LinkML, and from there other formats☆52Feb 4, 2026Updated 3 months ago
- KGX is a Python library for exchanging Knowledge Graphs☆140Apr 30, 2026Updated last week
- Compositional Dietary Nutrition Ontology☆14Feb 15, 2026Updated 2 months ago
- Ontology lifecycle management☆325Updated this week
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆23Mar 20, 2023Updated 3 years ago
- ☆26Jan 14, 2021Updated 5 years ago
- Source code and data repository for "Ensembles of knowledge graph embedding models improve predictions for drug discovery"☆20Jan 17, 2024Updated 2 years ago
- Automated assistance for the schema development lifecycle☆58Updated this week
- LLM retrieval augmented generation agent for the Monarch Knowledge graph.☆28Sep 17, 2025Updated 7 months ago
- A Python package for benchmarking pathway database with functional enrichment and classification methods☆13Mar 2, 2021Updated 5 years ago
- A resource of adverse drug effects extracted from FDA structured product labels☆99Apr 28, 2026Updated last week