related-sciences / nxontology
NetworkX-based Python library for representing ontologies
☆86Updated last year
Alternatives and similar repositories for nxontology:
Users that are interested in nxontology are comparing it to the libraries listed below
- Grounding of biomedical named entities with contextual disambiguation☆43Updated 3 weeks ago
- Software repo for Team Expander Agent (Oregon State U., Institute for Systems Biology, and Penn State U.)☆33Updated this week
- KGX is a Python library for exchanging Knowledge Graphs☆122Updated 2 months ago
- python library for working with ontologies and ontology associations☆128Updated 2 months ago
- 🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from prima…☆52Updated 2 weeks ago
- 📛 A Python package for using ontologies, terminologies, and biomedical nomenclatures☆63Updated this week
- Ontology cross-reference and mapping service☆18Updated 9 months ago
- OntoMerger is an ontology alignment library for deduplicating knowledge graph nodes that represent the same domain.☆95Updated last year
- mOWL: Machine Learning library with Ontologies☆65Updated 2 months ago
- a tool for mapping free-text descriptions of entities to ontology terms☆20Updated 8 months ago
- PheKnowLator: Heterogeneous Biomedical Knowledge Graphs and Benchmarks Constructed Under Alternative Semantic Models☆185Updated 11 months ago
- An instance of KG Hub to produce a knowledge graph for COVID-19 response.☆81Updated last year
- 🍇 Embiggen is the Python Graph Representation learning, Prediction and Evaluation submodule of the GRAPE library.☆42Updated last year
- ☆24Updated 4 years ago
- ☆128Updated 2 years ago
- Ontology Access Kit: A python library and command line application for working with ontologies☆138Updated this week
- Fast, world class biomedical NER☆86Updated last month
- Version 4 of the EMBL-EBI Ontology Lookup Service (OLS)☆62Updated this week
- A Database-based knowledge back-end built on and for INDRA. The INDRA Database is a service that can be set up by any user with their own…☆16Updated 3 weeks ago
- Map your disease and phenotype terms to the Open Targets platform ontology☆21Updated 4 months ago
- The symptom ontology was designed around the guiding concept of a symptom being: “A perceived change in function, sensation or appearance…☆41Updated 10 months ago
- Data transformation framework for LinkML data models☆52Updated last month
- A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhub☆32Updated last year
- Turning Ontologies Plus Annotation Properties into Vectors☆35Updated 4 years ago
- OBO-formatted ontologies → networkx (Python 3)☆137Updated 2 weeks ago
- 🪝 What's the latest version for each database?☆27Updated this week
- Python toolkit for SSSOM mapping format☆53Updated this week
- Data ingest application for Monarch Initiative knowledge graph using Koza☆16Updated this week
- TypeDB Bio: Biomedical Knowledge Graph☆86Updated 9 months ago
- Integrated OBO ontology store☆44Updated last month