nlpie / biomedicusLinks
BioMedICUS: A biomedical and clinical NLP engine.
☆19Updated 2 weeks ago
Alternatives and similar repositories for biomedicus
Users that are interested in biomedicus are comparing it to the libraries listed below
Sorting:
- A near real-time named-entity recognizer☆60Updated last year
- A Serverless Text Annotation Tool for Corpus Development☆56Updated 3 months ago
- Medical Relations and Entities Extraction☆36Updated 2 years ago
- MedTagger is a light weight clinical NLP system built upon Apache UIMA.☆68Updated last month
- Python wrapper for UMLS REST API☆10Updated 6 years ago
- Semantic query and text mining tool☆22Updated last year
- Weakly supervised medical named entity classification☆73Updated 2 years ago
- Transformers for Clinical NLP☆25Updated 2 weeks ago
- Platform enabling Rapid Annotation for Clinical Entity Recognition☆50Updated 3 years ago
- SKR Web API: Python implementation☆41Updated last year
- Data and code from our "Inferring Which Medical Treatments Work from Reports of Clinical Trials", NAACL 2019. This work concerns inferrin…☆62Updated 3 years ago
- ☆98Updated 3 years ago
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆80Updated 2 weeks ago
- A clinical BERT-based NLP tool for parsing clinical trial abstracts following the PICO framework☆45Updated 4 years ago
- ☆67Updated 3 years ago
- [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis☆32Updated last year
- Adversarial Learning of Knowledge Embeddings for the Unified Medical Language System☆40Updated 5 years ago
- An exploratory, tutorial and analytical view of the Unified Medical Language System (UMLS) & the software/technologies provided via being…☆43Updated last year
- ☆55Updated 5 years ago
- ✖️MEN - A Modular Toolkit for Cross-Lingual Medical Entity Normalization☆27Updated 5 months ago
- BiOnt: Deep Learning using Multiple Biomedical Ontologies for Relation Extraction☆26Updated last year
- Tools to create a clinical knowledge graph from biomedical literature. Includes wrappers for NCBI Eutils, cTakes annotator and Neo4J☆16Updated 11 months ago
- Medical Similarity Dataset creation from SNOMED☆28Updated 2 years ago
- ☆22Updated 2 years ago
- PubMed PICO Element Detection Dataset☆57Updated 6 years ago
- A comprehensive NLP preprocessing package for clinical notes sentence boundary detection, tokenization☆31Updated last year
- Weak supervision methods for extracting real world evidence from EHRs☆33Updated 5 years ago
- Universal Dependencies (v1.0) for the GENIA 1.0 Treebank, along with additional raw abstracts and metadata.☆22Updated 5 years ago
- Code for manipulating the structure of UMLS files and converting ontologies or sets of ontologies into a graph structure.☆41Updated 4 years ago
- ☆18Updated last year