nlpie / biomedicusLinks
BioMedICUS: A biomedical and clinical NLP engine.
☆19Updated 3 weeks ago
Alternatives and similar repositories for biomedicus
Users that are interested in biomedicus are comparing it to the libraries listed below
Sorting:
- A Serverless Text Annotation Tool for Corpus Development☆56Updated 4 months ago
- A near real-time named-entity recognizer☆61Updated this week
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆81Updated last week
- MedTagger is a light weight clinical NLP system built upon Apache UIMA.☆69Updated 2 months ago
- Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research☆89Updated 2 years ago
- ☆67Updated 3 years ago
- ☆55Updated 5 years ago
- Code for manipulating the structure of UMLS files and converting ontologies or sets of ontologies into a graph structure.☆41Updated 4 years ago
- Data and code from our "Inferring Which Medical Treatments Work from Reports of Clinical Trials", NAACL 2019. This work concerns inferrin…☆62Updated 3 years ago
- Platform enabling Rapid Annotation for Clinical Entity Recognition☆50Updated 3 years ago
- An exploratory, tutorial and analytical view of the Unified Medical Language System (UMLS) & the software/technologies provided via being…☆43Updated last year
- A clinical BERT-based NLP tool for parsing clinical trial abstracts following the PICO framework☆45Updated 4 years ago
- Clinical Natural Language Processing using spaCy, scispacy, and medspacy☆100Updated last year
- Medical Relations and Entities Extraction☆36Updated 3 years ago
- PubMed PICO Element Detection Dataset☆57Updated 6 years ago
- ☆98Updated 3 years ago
- A python package for removing duplicate text in clinical notes or other documents☆37Updated 4 years ago
- Weakly supervised medical named entity classification☆73Updated 2 years ago
- Health knowledge graph for 157 diseases and 491 symptoms, learned from >270,000 patients' data☆101Updated 4 years ago
- CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]☆80Updated 3 years ago
- ☆16Updated 4 years ago
- Estimate similarity of medical concepts based on Unified Medical Language System (UMLS)☆16Updated 3 years ago
- a module to calculate the MeSH similarity☆25Updated 3 years ago
- SKR Web API: Python implementation☆42Updated last year
- UMLS Graph database for semantic queries☆22Updated 2 years ago
- MedType: Improving Medical Entity Linking with Semantic Type Prediction☆116Updated 2 years ago
- A corpus of Biomedical papers annotated with mentions of UMLS entities.☆329Updated 3 years ago
- ☆30Updated 4 years ago
- Medical Similarity Dataset creation from SNOMED☆28Updated 3 years ago
- Weak supervision methods for extracting real world evidence from EHRs☆34Updated 5 years ago