ccb-hms / ontology-mapperLinks
a tool for mapping free-text descriptions of entities to ontology terms
☆21Updated 10 months ago
Alternatives and similar repositories for ontology-mapper
Users that are interested in ontology-mapper are comparing it to the libraries listed below
Sorting:
- Version 4 of the EMBL-EBI Ontology Lookup Service (OLS)☆63Updated this week
- Integrated OBO ontology store☆46Updated 3 weeks ago
- 🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from prima…☆54Updated last month
- Monarch Initiative website and API☆24Updated this week
- An experimental ontology containing key terms from Open Biological and Biomedical Ontologies (OBO)☆42Updated 2 weeks ago
- Ontology cross-reference and mapping service☆19Updated last month
- Data transformation framework for LinkML data models☆53Updated 3 months ago
- A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhub☆32Updated last year
- Data ingest application for Monarch Initiative knowledge graph using Koza☆17Updated last week
- Python toolkit for SSSOM mapping format☆54Updated last week
- Tools for working with KGCL☆18Updated 6 months ago
- sparql templates for linkml (alpha)☆11Updated 3 years ago
- Mapping between LinkML schemas☆22Updated last week
- Structure your data in a FAIR way using google sheets or TSVs. These are then converted to LinkML, and from there other formats☆44Updated last month
- Medical action ontology☆56Updated this week
- A tutorial on using Open Biological and Biomedical Ontologies (OBO)☆59Updated 6 years ago
- Evidence & Conclusion Ontology development site: Use ISSUES to request terms. See WIKI for how to request terms. See README for how to c…☆50Updated last month
- Semantic prefix map registry☆13Updated 7 months ago
- NetworkX-based Python library for representing ontologies☆90Updated last year
- Automated assistance for the schema development lifecycle☆47Updated 2 weeks ago
- 📛 A Python package for using ontologies, terminologies, and biomedical nomenclatures☆69Updated this week
- A collection of useful python functions for looking up information and working with the Biolink Model☆24Updated last week
- wrapper for multiple linkml storage engines☆21Updated 2 weeks ago
- NCATS Biomedical Translator Reasoners Standard API☆36Updated this week
- Standardized identifiers and OWL classes for chromosomes and chromosomal parts across species☆13Updated this week
- Summary Dashboard for Open Biological and Biomedical Ontologies☆21Updated 5 months ago
- Github repo for the Experimental Factor Ontology (EFO)☆56Updated 2 weeks ago
- Draft cell type definitions from data - candidates for inclusion in CL☆12Updated 4 months ago
- Semantic data model of the set of common data elements for rare disease registration☆12Updated last year
- Metadata schema for the German Human Genome-Phenome Archive (GHGA)☆14Updated 3 weeks ago