biolink / biolink-model-toolkitLinks
A collection of useful python functions for looking up information and working with the Biolink Model
β24Updated 3 weeks ago
Alternatives and similar repositories for biolink-model-toolkit
Users that are interested in biolink-model-toolkit are comparing it to the libraries listed below
Sorting:
- Integrated OBO ontology storeβ47Updated this week
- πΊοΈ Community curated and predicted equivalences and related mappings between named biological entities that are not available from primaβ¦β56Updated last week
- An experimental ontology containing key terms from Open Biological and Biomedical Ontologies (OBO)β43Updated 2 weeks ago
- Summary Dashboard for Open Biological and Biomedical Ontologiesβ23Updated 2 weeks ago
- β24Updated 4 years ago
- python library for working with ontologies and ontology associationsβ129Updated 5 months ago
- Ontology cross-reference and mapping serviceβ19Updated 2 months ago
- KGX is a Python library for exchanging Knowledge Graphsβ129Updated 2 weeks ago
- First pass at a thin wrapper around the Monarch API and ChatGPT pluginβ12Updated 3 months ago
- π A Python package for using ontologies, terminologies, and biomedical nomenclaturesβ70Updated last week
- NCATS Biomedical Translator Reasoners Standard APIβ37Updated last month
- Evidence & Conclusion Ontology development site: Use ISSUES to request terms. See WIKI for how to request terms. See README for how to cβ¦β50Updated 3 weeks ago
- DEPRECATED: replaced by linkmlβ23Updated 4 years ago
- A stitching platform for InXightβ15Updated 3 months ago
- An instance of KG Hub to produce a knowledge graph for COVID-19 response.β82Updated last year
- The Ontology for Biomedical Investigationsβ85Updated last week
- OntoBrowser is a web-based application for managing ontologiesβ42Updated 2 years ago
- β15Updated 3 weeks ago
- The symptom ontology was designed around the guiding concept of a symptom being: βA perceived change in function, sensation or appearanceβ¦β41Updated last year
- Map your disease and phenotype terms to the Open Targets platform ontologyβ21Updated 3 weeks ago
- Mapping between LinkML schemasβ23Updated last week
- Grounding of biomedical named entities with contextual disambiguationβ45Updated 2 months ago
- A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhubβ32Updated last year
- LLM-driven curation assist toolβ90Updated last week
- A tutorial on using Open Biological and Biomedical Ontologies (OBO)β59Updated 6 years ago
- An app and library for building, conversion, and validation of GA4GH Phenopackets.β16Updated 2 weeks ago
- The EMBL-EBI Ontology Lookup Service (OLS)β66Updated this week
- Data ingest application for Monarch Initiative knowledge graph using Kozaβ17Updated this week
- LLM retrieval augmented generation agent for the Monarch Knowledge graph.β24Updated last week
- πͺ What's the latest version for each database?β27Updated this week