rs239 / abmapLinks
Protein language model customized for antibodies
☆147Updated 9 months ago
Alternatives and similar repositories for abmap
Users that are interested in abmap are comparing it to the libraries listed below
Sorting:
- ☆133Updated last year
- FAPLM: A Drop-in Efficient Pytorch Implementation of Protein Language Models☆160Updated 5 months ago
- Joint embedding of protein sequence and structure with discrete and continuous compressions of protein folding model latent spaces. http:…☆146Updated 8 months ago
- A generalized computational framework for biomolecular modeling.☆381Updated last week
- Official repository for the paper "Tranception: Protein Fitness Prediction with Autoregressive Transformers and Inference-time Retrieval"☆161Updated 2 years ago
- Proteina is a new large-scale flow-based protein backbone generator that utilizes hierarchical fold class labels for conditioning and rel…☆226Updated 5 months ago
- A partially latent flow matching model for the joint generation of a protein’s amino acid sequence and full atomistic structure, includin…☆252Updated 3 months ago
- Generative Language Modeling for Antibody Design☆176Updated last year
- ProtMamba: a homology-aware but alignment-free protein state space model☆82Updated 6 months ago
- Improved antibody structure-based design using inverse folding☆147Updated 3 weeks ago
- Dataset and package for working with protein-protein interactions in 3D☆99Updated 8 months ago
- ☆99Updated 3 weeks ago
- Implementation of Chroma, generative models of protein using DDPM and GNNs, in Pytorch☆159Updated 3 years ago
- IntelliFold: A Controllable Foundation Model for General and Specialized Biomolecular Structure Prediction.☆157Updated 5 months ago
- Codebase for Germinal, a broadly enabling generative pipeline for efficient generation of epitope-targeted de novo antibodies.☆178Updated last month
- gRNAde is a Generative AI framework for inverse design of 3D RNA structure and function☆281Updated 2 weeks ago
- Plugin for folding sequences directly in PyMOL☆112Updated 4 months ago
- Diffusion-based all-atom protein generative model.☆228Updated 4 months ago
- Ankh: Optimized Protein Language Model☆238Updated 6 months ago
- Sandbox for Deep-Learning based Computational Protein Design☆120Updated 2 weeks ago
- All-atom protein generation using latent diffusion, with compositional function and taxonomic prompts. http://bit.ly/plaid-proteins☆115Updated 7 months ago
- Protein design and variant prediction using autoregressive generative models☆117Updated last year
- De Novo Protein Design by Equivariantly Diffusing Oriented Residue Clouds☆183Updated last year
- Combinatorial antibiotic generation☆193Updated 2 months ago
- Code for ColabDock paper☆150Updated 8 months ago
- Protein structure diffusion model for unconditional protein generation and motif scaffolding☆181Updated last year
- composite-objective protein design☆130Updated 3 weeks ago
- Lbster: Language models for Biological Sequence Transformation and Evolutionary Representation☆140Updated last week
- Versatile computational pipeline for processing protein structure data for deep learning applications.☆269Updated last year
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆125Updated last month