Alternatives and similar repositories for dnaplotlib

Users that are interested in dnaplotlib are comparing it to the libraries listed below

• mdshw5 / pyfaidx
  Efficient pythonic random access to fasta subsequences
  ☆478Updated 3 months ago
• openvax / pyensembl
  Python interface to access reference genome features (such as genes, transcripts, and exons) from Ensembl
  ☆397Updated 3 months ago
• pydna-group / pydna
  Clone with Python! Data structures for double stranded DNA & simulation of homologous recombination, Gibson assembly, cut & paste cloning…
  ☆209Updated last week
• primer3-org / primer3
  Primer3 is a command line tool to select primers for polymerase chain reaction (PCR).
  ☆272Updated 6 months ago
• bioSyntax / bioSyntax
  Syntax highlighting for computational biology
  ☆269Updated 2 years ago
• bioconvert / bioconvert
  Bioconvert is a collaborative project to facilitate the interconversion of life science data from one format to another.
  ☆385Updated 5 months ago
• zakandrewking / escher
  Build, share, and embed visualizations of metabolic pathways.
  ☆228Updated last year
• chapmanb / bcbb
  Incubator for useful bioinformatics code, primarily in Python and R
  ☆643Updated 10 months ago
• pyranges / pyranges
  Performant Pythonic GenomicRanges
  ☆491Updated last month
• pinellolab / CRISPResso2
  Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments
  ☆327Updated this week
• lmdu / pyfastx
  a python package for fast random access to sequences from plain and gzipped FASTA/Q files
  ☆290Updated 11 months ago
• gpertea / gffread
  GFF/GTF utility providing format conversions, region filtering, FASTA sequence extraction and more
  ☆445Updated 11 months ago
• daler / gffutils
  GFF and GTF file manipulation and interconversion
  ☆309Updated last year
• vanheeringen-lab / genomepy
  genes and genomes at your fingertips
  ☆404Updated 2 months ago
• deeptools / pyGenomeTracks
  python module to plot beautiful and highly customizable genome browser tracks
  ☆851Updated last year
• libnano / primer3-py
  Simple oligo analysis and primer design
  ☆184Updated 2 months ago
• EddyRivasLab / hmmer
  HMMER: biological sequence analysis using profile HMMs
  ☆389Updated 2 months ago
• ebi-pf-team / interproscan
  Genome-scale protein function classification
  ☆353Updated 3 weeks ago
• gamcil / clinker
  Gene cluster comparison figure generator
  ☆623Updated last year
• gecrooks / weblogo
  WebLogo 3: Sequence Logos redrawn
  ☆152Updated 7 months ago
• cggh / scikit-allel
  A Python package for exploring and analysing genetic variation data
  ☆306Updated last week
• deeptools / deepTools
  Tools to process and analyze deep sequencing data.
  ☆746Updated 4 months ago
• opencobra / memote
  memote – the genome-scale metabolic model test suite
  ☆143Updated 3 months ago
• biosustain / cameo
  cameo - computer aided metabolic engineering & optimization
  ☆122Updated 3 years ago
• ISUgenomics / bioinformatics-workbook
  Bioinformatics Workbook repository
  ☆196Updated 3 months ago
• peterjc / biopython_workshop
  A basic introduction to Biopython, intended for a classroom based workshop. Now on Codeberg.
  ☆225Updated 5 years ago
• jorvis / biocode
  Bioinformatics code libraries and scripts
  ☆551Updated 4 months ago
• marbl / Mash
  Fast genome and metagenome distance estimation using MinHash
  ☆426Updated 2 months ago
• stephaneguindon / phyml
  PhyML -- Phylogenetic estimation using (Maximum) Likelihood
  ☆194Updated 3 months ago
• saketkc / pysradb
  Package for fetching metadata and downloading data from SRA/ENA/GEO
  ☆347Updated 3 weeks ago