VoigtLab / dnaplotlibLinks
DNA plotting library for Python
☆299Updated last year
Alternatives and similar repositories for dnaplotlib
Users that are interested in dnaplotlib are comparing it to the libraries listed below
Sorting:
- Clone with Python! Data structures for double stranded DNA & simulation of homologous recombination, Gibson assembly, cut & paste cloning…☆207Updated this week
- Efficient pythonic random access to fasta subsequences☆479Updated 2 months ago
- Python interface to access reference genome features (such as genes, transcripts, and exons) from Ensembl☆398Updated 3 months ago
- Incubator for useful bioinformatics code, primarily in Python and R☆635Updated 9 months ago
- Primer3 is a command line tool to select primers for polymerase chain reaction (PCR).☆273Updated 6 months ago
- Simple oligo analysis and primer design☆184Updated 2 months ago
- Performant Pythonic GenomicRanges☆489Updated 3 weeks ago
- python module to plot beautiful and highly customizable genome browser tracks☆847Updated last year
- Python library to plot DNA sequence features (e.g. from Genbank files)☆662Updated 4 months ago
- Syntax highlighting for computational biology☆269Updated 2 years ago
- genes and genomes at your fingertips☆402Updated last month
- Bioconvert is a collaborative project to facilitate the interconversion of life science data from one format to another.☆385Updated 5 months ago
- Gene cluster comparison figure generator☆623Updated 11 months ago
- The COnstraint-Based Reconstruction and Analysis Toolbox. Documentation:☆269Updated last week
- WebLogo 3: Sequence Logos redrawn☆152Updated 6 months ago
- Python wrapper -- and more -- for BEDTools (bioinformatics tools for "genome arithmetic")☆327Updated 8 months ago
- A basic introduction to Biopython, intended for a classroom based workshop. Now on Codeberg.☆224Updated 5 years ago
- Bioinformatics code libraries and scripts☆551Updated 3 months ago
- GFF and GTF file manipulation and interconversion☆309Updated last year
- Build, share, and embed visualizations of metabolic pathways.☆228Updated last year
- memote – the genome-scale metabolic model test suite☆143Updated 3 months ago
- Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments☆322Updated last week
- Genome-scale protein function classification☆352Updated 3 weeks ago
- Tools to process and analyze deep sequencing data.☆742Updated 3 months ago
- a python package for fast random access to sequences from plain and gzipped FASTA/Q files☆290Updated 10 months ago
- Fast genome-wide functional annotation through orthology assignment☆669Updated 5 months ago
- Short read de novo assembler using de Bruijn graphs, as published in: D.R. Zerbino and E. Birney. 2008. Velvet: algorithms for de novo sh…☆293Updated last month
- Bioinformatics Workbook repository☆195Updated 2 months ago
- The RAVEN Toolbox for genome scale model reconstruction, curation and analysis.☆118Updated last week
- GFF/GTF utility providing format conversions, region filtering, FASTA sequence extraction and more☆446Updated 10 months ago