Alternatives and similar repositories for dnaplotlib

Users that are interested in dnaplotlib are comparing it to the libraries listed below

• openvax / pyensembl
  Python interface to access reference genome features (such as genes, transcripts, and exons) from Ensembl
  ☆399Updated 5 months ago
• mdshw5 / pyfaidx
  Efficient pythonic random access to fasta subsequences
  ☆482Updated 5 months ago
• primer3-org / primer3
  Primer3 is a command line tool to select primers for polymerase chain reaction (PCR).
  ☆275Updated 8 months ago
• pydna-group / pydna
  Clone with Python! Data structures for double stranded DNA & simulation of homologous recombination, Gibson assembly, cut & paste cloning…
  ☆215Updated this week
• libnano / primer3-py
  Simple oligo analysis and primer design
  ☆190Updated last week
• bioSyntax / bioSyntax
  Syntax highlighting for computational biology
  ☆270Updated 2 years ago
• bioconvert / bioconvert
  Bioconvert is a collaborative project to facilitate the interconversion of life science data from one format to another.
  ☆386Updated 7 months ago
• vanheeringen-lab / genomepy
  genes and genomes at your fingertips
  ☆406Updated 4 months ago
• pyranges / pyranges
  Performant Pythonic GenomicRanges
  ☆493Updated last week
• peterjc / biopython_workshop
  A basic introduction to Biopython, intended for a classroom based workshop. Now on Codeberg.
  ☆226Updated 5 years ago
• chapmanb / bcbb
  Incubator for useful bioinformatics code, primarily in Python and R
  ☆645Updated last year
• zakandrewking / escher
  Build, share, and embed visualizations of metabolic pathways.
  ☆232Updated last year
• daler / gffutils
  GFF and GTF file manipulation and interconversion
  ☆314Updated last week
• cggh / scikit-allel
  A Python package for exploring and analysing genetic variation data
  ☆311Updated last month
• The-Sequence-Ontology / Specifications
  GFF and GVF specification documents
  ☆219Updated last year
• daler / pybedtools
  Python wrapper -- and more -- for BEDTools (bioinformatics tools for "genome arithmetic")
  ☆328Updated 10 months ago
• ISUgenomics / bioinformatics-workbook
  Bioinformatics Workbook repository
  ☆204Updated last month
• lmdu / pyfastx
  a python package for fast random access to sequences from plain and gzipped FASTA/Q files
  ☆289Updated 3 weeks ago
• g2nb / igv-jupyter
  Extension for Jupyter which integrates igv.js
  ☆154Updated 3 years ago
• biologyguy / BuddySuite
  Bioinformatics toolkits for manipulating sequence, alignment, and phylogenetic tree files
  ☆129Updated 4 years ago
• pinellolab / CRISPResso2
  Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments
  ☆331Updated last week
• GangCaoLab / CoolBox
  Jupyter notebook based genomic data visualization toolkit.
  ☆249Updated 2 months ago
• deeptools / pyGenomeTracks
  python module to plot beautiful and highly customizable genome browser tracks
  ☆862Updated last year
• ebi-pf-team / interproscan
  Genome-scale protein function classification
  ☆364Updated last week
• gecrooks / weblogo
  WebLogo 3: Sequence Logos redrawn
  ☆154Updated last week
• bxlab / bx-python
  Tools for manipulating biological data, particularly multiple sequence alignments
  ☆159Updated last week
• simon-anders / htseq
  HTSeq is a Python library to facilitate processing and analysis of data from high-throughput sequencing (HTS) experiments.
  ☆129Updated 5 years ago
• Edinburgh-Genome-Foundry / DnaFeaturesViewer
  Python library to plot DNA sequence features (e.g. from Genbank files)
  ☆679Updated 7 months ago
• tanghaibao / goatools
  Python library to handle Gene Ontology (GO) terms
  ☆876Updated last month
• BenLangmead / comp-genomics-class
  Code and examples for JHU Computational Genomics class
  ☆307Updated last year