Alternatives and similar repositories for SyntheMol:

Users that are interested in SyntheMol are comparing it to the libraries listed below

• colbyford / PyMOLfold
  Plugin for folding sequences directly in PyMOL
  ☆86Updated last month
• swansonk14 / admet_ai
  Training and prediction scripts for Chemprop models trained on ADMET datasets
  ☆129Updated 5 months ago
• LPDI-EPFL / masif-neosurf
  MaSIF-neosurf: surface-based protein design for ternary complexes.
  ☆99Updated this week
• jssweller / DrugHIVE
  DrugHIVE: Structure-based drug design with a deep hierarchical generative model
  ☆70Updated 4 months ago
• westlake-repl / SaprotHub
  Making Protein Modeling Accessible to All Biologists
  ☆100Updated this week
• recursionpharma / mole_public
  Recursion's molecular foundation model
  ☆39Updated 5 months ago
• anton-bushuiev / PPIRef
  Dataset and package for working with protein-protein interactions in 3D
  ☆90Updated last month
• JeffSHF / ColabDock
  Code for ColabDock paper
  ☆136Updated 4 months ago
• patrickbryant1 / Cfold
  Structure prediction of alternative protein conformations
  ☆74Updated 2 weeks ago
• pengzhangzhi / faplm
  FAPLM: A Drop-in Efficient Pytorch Implementation of Protein Language Models
  ☆113Updated 3 weeks ago
• LBM-EPFL / PeSTo
  Geometric deep learning method to predict protein binding interfaces from a protein structure.
  ☆121Updated last year
• martinez-zacharya / TRILL
  Sandbox for Deep-Learning based Computational Protein Design
  ☆109Updated 2 weeks ago
• patrickbryant1 / Umol
  Protein-ligand structure prediction
  ☆210Updated 7 months ago
• amyxlu / cheap-proteins
  Joint embedding of protein sequence and structure with discrete and continuous compressions of protein folding model latent spaces. http:…
  ☆110Updated 2 months ago
• AstraZeneca / DiffAbXL
  The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…
  ☆66Updated 4 months ago
• WillHua127 / EnzymeFlow
  Official repository of EnzymeFlow
  ☆80Updated 3 months ago
• oxpig / AntiFold
  Improved antibody structure-based design using inverse folding
  ☆96Updated last month
• pinder-org / pinder
  PINDER: The Protein INteraction Dataset and Evaluation Resource
  ☆104Updated 3 months ago
• Kuhlman-Lab / evopro
  ☆73Updated last month
• tiwarylab / GrASP
  Graph Attention Site Prediction (GrASP): Identifying Druggable Binding Sites Using Graph Neural Networks with Attention
  ☆49Updated 4 months ago
• HWaymentSteele / AF_Cluster
  Predict multiple protein conformations using sequence clustering and AlphaFold2.
  ☆148Updated 2 weeks ago
• jproney / AF2Rank
  ☆100Updated 2 years ago
• cddlab / alphafold3_tools
  Toolkit for alphafold3 input and output files
  ☆63Updated this week
• RyanZR / labodock
  LABODOCK: A Colab-Based Molecular Docking Tools
  ☆45Updated last month
• hefeda / design_tools
  A compilation of deep learning methods for protein design
  ☆97Updated 2 years ago
• Graylab / GeoDock
  Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.
  ☆88Updated 7 months ago
• jamesgleave / DD_protocol
  Official repository for the Deep Docking protocol
  ☆115Updated last year
• ChatterjeeAyan / AI-Bind
  Interpretable AI pipeline improving binding predictions for novel protein targets and ligands
  ☆29Updated 10 months ago
• learningmatter-mit / peptimizer
  Peptide optimization with Machine Learning
  ☆72Updated 2 years ago