Alternatives and similar repositories for course_protein_language_modeling

Users that are interested in course_protein_language_modeling are comparing it to the libraries listed below

• ProteinDesignLab / protein-design-tutorials
  Tutorials, cheat sheets, and other resources for computational methods for protein design.
  ☆113Updated last year
• timkartar / DeepPBS
  Geometric deep learning of protein–DNA binding specificity
  ☆74Updated 3 months ago
• JeffSHF / ColabDock
  Code for ColabDock paper
  ☆141Updated last month
• varun-shanker / structural-evolution
  ☆109Updated 11 months ago
• prihoda / AbNumber
  Convenience Python APIs for antibody numbering using ANARCI
  ☆97Updated last month
• jcheongs / alphafold-multimer
  ☆31Updated 3 years ago
• mheinzinger / ProstT5
  Bilingual Language Model for Protein Sequence and Structure
  ☆252Updated 5 months ago
• phbradley / TCRdock
  python tools for TCR:peptide-MHC modeling and analysis
  ☆79Updated last year
• phbradley / alphafold_finetune
  Python code for fine-tuning AlphaFold to perform protein-peptide binding predictions
  ☆151Updated last year
• idmjky / EvolvePro
  PLM based active learning model for protein engineering
  ☆82Updated 10 months ago
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆49Updated 2 months ago
• brianhie / efficient-evolution
  Efficient evolution from protein language models
  ☆207Updated last year
• lbcb-sci / RiNALMo
  RiboNucleic Acid (RNA) Language Model
  ☆109Updated 3 weeks ago
• VarunUllanat / mint
  Learning the language of protein-protein interactions
  ☆77Updated 3 weeks ago
• pylelab / USalign
  Universal Structure Alignment of Monomeric and Complex Structure of Nucleic Acids and Proteins
  ☆145Updated 2 months ago
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆88Updated last year
• Shunsuke-1994 / rfamgen
  Code repository of "Deep generative design of RNA family sequences"
  ☆35Updated 11 months ago
• tymor22 / tm-vec
  ☆68Updated 9 months ago
• westlake-repl / SaprotHub
  Making Protein Modeling Accessible to All Biologists
  ☆113Updated this week
• robpearc / DeepFoldRNA
  ☆35Updated last year
• TencentAI4S / tfold
  open source code for Tencent tFold
  ☆101Updated 3 months ago
• westlake-repl / ESM-Ezy
  ☆23Updated 2 months ago
• hugohrban / ProGen2-finetuning
  Finetuning ProGen2 protein language model for generation of protein sequences from selected protein families.
  ☆60Updated 4 months ago
• maovshao / PLMSearch
  PLMSearch enables accurate and fast homologous protein search with only sequences as input
  ☆73Updated 6 months ago
• Graylab / AlphaRED
  AlphaFold-initiated replica exchange protein docking
  ☆83Updated 3 weeks ago
• althonos / peptides.py
  Physicochemical properties, indices and descriptors for amino-acid sequences.
  ☆97Updated 2 months ago
• pgmikhael / protgps
  ☆87Updated last week
• patrickbryant1 / EvoBind
  In silico directed evolution of peptide binders with AlphaFold
  ☆201Updated 2 weeks ago
• fhalab / MLDE
  A machine-learning package for navigating combinatorial protein fitness landscapes.
  ☆125Updated 3 years ago
• oxpig / AntiFold
  Improved antibody structure-based design using inverse folding
  ☆126Updated last month