DongqiangZeng0808 / Blasso
Integrating LASSO and bootstrapping algorithm to find best prognostic or predictive biomarkers
β20Updated 2 years ago
Alternatives and similar repositories for Blasso:
Users that are interested in Blasso are comparing it to the libraries listed below
- π― tigeR: Tumor Immunotherapy Gene Expression Data Analysis R packageβ29Updated 8 months ago
- Calculating Tumor microenvironment scoreβ28Updated 2 years ago
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020β31Updated 3 years ago
- This repo contains the code necessary to reproduce the clusters found in "The Immune Landscape of Cancer".β18Updated 5 years ago
- Prostate Cancer Alteration Signature Analysis https://xsliulab.github.io/PC_CNA_signature/β12Updated 3 years ago
- Human brain, >200,000 nucleiβ24Updated 3 years ago
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumoursβ26Updated 4 years ago
- β29Updated 6 years ago
- Kidney Epigenome and Transcriptome-based multi-stage Prioritizationβ16Updated 2 years ago
- Code to reproduce TNBC analysis and figuresβ23Updated 2 years ago
- Immune evasion before tumor invasion in early squamous lung cell carcinogenesisβ16Updated 3 years ago
- β13Updated 7 years ago
- Pseudotime Analysis for Bulk Dataβ14Updated 6 months ago
- Human Endometrial Cell Atlas (HECA). An integrated single-cell reference atlas of the human endometrium.β24Updated 8 months ago
- An R package for visualising cell-cell interactionsβ43Updated 6 months ago
- R packageβ22Updated last year
- β11Updated 5 years ago
- ImmuCellAI (Immune Cell Abundance Identifier) is a tool to estimate the abundance of 24 immune cells from gene expression dataset includiβ¦β14Updated last year
- Calculate NEPC risk score from bulk transcriptome data or single-cell RNA-seq for prostate cancerβ13Updated 2 months ago
- R package for Flexible dot plotsβ29Updated 2 years ago
- This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.β12Updated 2 years ago
- β15Updated last year
- β9Updated 5 months ago
- β23Updated last year
- cell type deconvolution for multi-condition bulk RNA-seq dataβ23Updated 2 years ago
- Validating glioblastoma immune cell immunohistochemsitry using computational deconvolution of TCGA tumorsβ14Updated 5 years ago
- Dichotomous of innate immune landscapeβ17Updated 5 years ago
- The source code of web server TIP, including example data.β19Updated 5 years ago
- β26Updated 4 years ago
- β16Updated 2 years ago