DasLab / draw_rna
Draw RNA secondary structures in python.
☆47Updated 6 months ago
Alternatives and similar repositories for draw_rna:
Users that are interested in draw_rna are comparing it to the libraries listed below
- ☆71Updated last year
- Improving RNA structure prediction through multitask learning on diverse crowdsourced data.☆57Updated 8 months ago
- Visualize global properties of large RNAs using GraphViz force-directed layout.☆20Updated last year
- bpRNA: Large-scale Annotation and Analysis of RNA Secondary Structure☆47Updated last year
- Evolutionary velocity with protein language models☆90Updated last year
- RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis☆38Updated 3 weeks ago
- Species-aware DNA language modeling☆18Updated 2 years ago
- Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Jo…☆65Updated 2 years ago
- Interpretation by Deep Generative Masking for Biological Sequences☆37Updated 3 years ago
- Stochastic Sequence Propagation - A Keras Model for optimizing DNA, RNA and protein sequences based on a predictor☆47Updated 7 months ago
- accurate prediction of promoter activity and variant effects from massive parallel reporter assays☆35Updated 5 months ago
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆71Updated this week
- python tools for TCR:peptide-MHC modeling and analysis☆72Updated 11 months ago
- ScanFold is an RNA sequence scanning pipeline which attempts to identify potentially functional RNA secondary structures. This is done by…☆17Updated 2 years ago
- Multi-class signal peptide prediction and structure decoding model.☆83Updated last month
- Collection of papers related to BCR repertoire analyses☆18Updated 3 years ago
- Diverse Genomic Embedding Benchmark☆43Updated this week
- BigMHC predicts MHC-I (neo)epitope presentation and immunogenicity☆50Updated 11 months ago
- Comprehensive Python client for the Uniprot REST API☆46Updated 7 months ago
- An RNA manipulation library.☆54Updated last year
- Protein 3D structure prediction pipeline☆76Updated this week
- ☆36Updated 2 months ago
- Mutation effects predicted from sequence co-variation☆63Updated 7 years ago
- Python package and command line tool for epitope prediction☆51Updated 7 months ago
- Modeling of human 5′ UTRs enables the design of new sequences for target levels of translation and 5′ UTR variant prediction.☆44Updated 5 years ago
- An error model and pipeline for analyzing deep mutational scanning (DMS) data and diagnosing common experimental pathologies☆30Updated 3 weeks ago
- retrieve protein sequence identifiers and metadata from http://uniprot.org☆67Updated 3 years ago
- Automatic oligonucleotide design for PCR-based gene synthesis☆43Updated 5 years ago
- VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.☆42Updated this week
- Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Jo…☆167Updated last year