Alternatives and similar repositories for Leaf-GP

Users that are interested in Leaf-GP are comparing it to the libraries listed below

• Gregor-Mendel-Institute / aradeepopsis
  A versatile, fully open-source pipeline to extract phenotypic measurements from plant images
  ☆43Updated 3 months ago
• carnegie / QTG_Finder
  QTG_Finder, a QTL causal gene prioritization tool
  ☆11Updated 10 months ago
• gengit / PosiGene
  ☆26Updated 4 years ago
• ChrisCreevey / clann
  Clann: constructing consensus trees and supertrees from multiple source trees
  ☆17Updated 5 months ago
• bcbc-group / Botany2020NMGWorkshop
  A repo for scripts and associated files for the Botany 2020 Virtual Nonmodel Genomics Workshop
  ☆15Updated 5 years ago
• tomas-fer / HybPhyloMaker
  Bash scripts for analysis of Hyb-Seq data (from raw reads to species trees/networks)
  ☆20Updated last week
• RILAB / lab-docs
  The Ross-Ibarra's lab documentation
  ☆26Updated 3 years ago
• FePhyFoFum / PyPHLAWD
  Python version of PHLAWD
  ☆21Updated 10 months ago
• mmollina / MAPpoly
  Genetic maps in autopolyploids
  ☆30Updated 3 months ago
• petrelharp / popbio
  a short graduate population biology course
  ☆12Updated 2 years ago
• dcgerard / updog
  Flexible Genotyping of Polyploids using Next Generation Sequencing Data
  ☆30Updated 11 months ago
• rhysf / HaplotypeTools
  A toolkit for identifying recombination and recombinant genotypes
  ☆25Updated 2 years ago
• carnegie / PlantClusterFinder
  ☆17Updated last year
• bpucker / MGSE
  Mapping-based Genome Size Estimation (MGSE) performs an estimation of a genome size based on a read mapping to an existing genome sequenc…
  ☆35Updated 2 months ago
• davidrasm / Espalier
  Espalier is a Python package for working with discordant phylogenetic trees using maximum agreement forests.
  ☆12Updated 2 years ago
• nicocriscuolo / StructuRly
  Comprehensive, detailed and interactive plots for STRUCTURE and ADMIXTURE population analysis
  ☆21Updated 9 months ago
• lliu1871 / mp-est
  MP-EST estimates species trees from a set of gene trees by maximizing a pseudo-likelihood function
  ☆12Updated 2 years ago
• whussain2 / Analysis-pipeline
  ☆35Updated 3 years ago
• MrTomRod / orthofinder-tools
  Tools to process OrthoFinder output: Calculate the most common gene name of an orthogroup by majority vote and create plots analogous to …
  ☆19Updated last year
• macroevolution / bamm
  A program for multimodel inference on speciation and trait evolution
  ☆34Updated 8 years ago
• bpucker / APPLS
  Applied Python Programming for Life Scientists
  ☆25Updated 4 years ago
• TurakhiaLab / ROADIES
  Tool for fully-automated inference of species trees from raw genome assemblies
  ☆39Updated 3 months ago
• futurefanzhang / Adaptation-to-climate-change-of-alfalfa
  This is the script used for analysis the population data of alfalfa
  ☆10Updated last year
• evolbioinfo / pastml
  Ancestral character reconstruction and visualisation for rooted phylogenetic trees
  ☆35Updated 3 months ago
• theandygross / TCGA
  ☆36Updated 8 years ago
• caballero / RepeatLandscape
  profile the repeat landscape in a genome
  ☆16Updated 11 years ago
• pievos101 / PopGenome
  An Efficient Swiss Army Knife for Population Genomic Analyses in R
  ☆37Updated last year
• computations / root_digger
  A tool to root phylogenies
  ☆21Updated last year
• rystanley / genepopedit
  Simple and flexible manipulation of genomic data.
  ☆16Updated 5 months ago
• mmcco / RepeatScout
  The RepeatScout 1.0.5, written by Pevzner et al., source code for browsing. The official release and more information are available at h…
  ☆16Updated 2 years ago