weng-lab / ATLASLinks
Altered TCR Ligand Affinities and Structures
β11Updated last year
Alternatives and similar repositories for ATLAS
Users that are interested in ATLAS are comparing it to the libraries listed below
Sorting:
- IMSEQ - IMmunogenetic SEQuence Analysisβ15Updated 7 years ago
 - πΆ hlabud: HLA genotype analysis in Rβ17Updated 6 months ago
 - Add functional variant annotation to MAF fileβ11Updated 11 months ago
 - Telomerecat: The telomere computational analysis toolβ14Updated 5 years ago
 - Analysis tools for PhIP-seq experimentsβ12Updated 3 years ago
 - Convert TCR gene namesβ15Updated 2 weeks ago
 - β13Updated 9 years ago
 - Kinship In Mixed Model Analysis of RNA-seqβ13Updated 6 months ago
 - A simple, intuitive and Efficient single cell binary Data Storage formatβ15Updated 6 years ago
 - MEM mapper prototypeβ13Updated 4 years ago
 - amplicon/smMIP mapping and analysis pipelineβ11Updated 2 years ago
 - scpca-nf is the Nextflow workflow for processing Single-cell Pediatric Cancer Atlas Portal dataβ13Updated this week
 - β10Updated 6 years ago
 - R interface to megadepth: BigWig and BAM related utilitiesβ12Updated 10 months ago
 - β14Updated 3 weeks ago
 - TFregulomeR reveals transcription factorsβ context-specific features and functionsβ15Updated 3 years ago
 - Genomic trajectories (pseudotimes) in the presence of heterogenous environmental and genetic backgroundsβ11Updated 6 years ago
 - A set of tools for accurate quantitation of single-cell allele-specific expressionβ13Updated 2 years ago
 - Extracting mutational signatures via LASSO. The manuscript of the method is published on PLOS Computational Biology and available at: httβ¦β11Updated 2 weeks ago
 - Smooth-quantile Normalization Adaptation for Inference of co-expression Linksβ16Updated 2 years ago
 - stageR packageβ13Updated 2 years ago
 - A JBrowse plugin for creating sashimi or junction style plots from RNA-seq dataβ14Updated 4 years ago
 - R package specialized in HLA typing clustering and visualization based on specific similarity metricsβ14Updated 5 years ago
 - The JunctionSeq R package is a powerful tool for testing and visualizing differential usage of exons and splice junctions in next-generatβ¦β28Updated 8 years ago
 - Perturb-seq analysis packageβ15Updated last year
 - Comparison of Adaptive Immune Receptor Repertoiresβ28Updated 9 months ago
 - Clinical Variant Annotation Pipelineβ10Updated 5 years ago
 - An alignment and analysis pipeline for Ribosome Profiling and RNA-seq dataβ13Updated last year
 - Building the constrained coding regions (CCR) modelβ16Updated 6 years ago
 - Hera-T, a fast and accurate tool for estimating gene abundances in single cell data generated by the 10X-Chromium protocolβ18Updated 3 years ago