Altered TCR Ligand Affinities and Structures
β12Dec 1, 2023Updated 2 years ago
Alternatives and similar repositories for ATLAS
Users that are interested in ATLAS are comparing it to the libraries listed below
Sorting:
- π An interactive browser for the VDJdb databaseβ15Mar 14, 2026Updated last week
- β18Nov 18, 2025Updated 4 months ago
- MEM mapper prototypeβ13Nov 28, 2020Updated 5 years ago
- IMSEQ - IMmunogenetic SEQuence Analysisβ15Aug 10, 2018Updated 7 years ago
- Published at Bioinformaticsβ12Jul 4, 2024Updated last year
- TCRGP, a novel Gaussian process method that can predict if TCRs recognize certain epitopes. This method can utilize different CDR sequencβ¦β30Jan 31, 2023Updated 3 years ago
- β14Oct 16, 2025Updated 5 months ago
- Integrating neurosymbolic representations into LLMs for interpretability, steering, and running symbolic algorithmsβ14Feb 2, 2026Updated last month
- ποΈ Git-based TCR database storage & management. Submissions welcome!β153Updated this week
- Infer selection pressures on features of amino acid CDR3 sequences.β25Apr 17, 2024Updated last year
- Skype for Business Android Uri Sampleβ10Aug 22, 2019Updated 6 years ago
- Comparative evaluation of different methods for TCR clusteringβ12Aug 28, 2018Updated 7 years ago
- Fast, sensitive and accurate protein remote homology search on GPUsβ16May 6, 2024Updated last year
- Clothoβ11Jul 14, 2015Updated 10 years ago
- OpenChord is a Python library for creating chord diagrams.β11Feb 4, 2025Updated last year
- A curated list of awesome Neuro-Symbolic AI frameworks, libraries, software, papers, and videos.β14Nov 1, 2022Updated 3 years ago
- βοΈ Matching T-cell repertoire against a database of TCR antigen specificitiesβ39Feb 23, 2026Updated 3 weeks ago
- A list of papers about concept bottleneck models (CBMs)β22Nov 12, 2025Updated 4 months ago
- π¨ R package: Unified Handling of Graphics Devicesβ19Dec 14, 2025Updated 3 months ago
- V'DJer - B Cell Receptor Repertoire Reconstruction from short read mRNA-Seq dataβ29Aug 9, 2022Updated 3 years ago
- Quantifiable predictive features define epitope-specific T cell receptor repertoiresβ13Dec 8, 2022Updated 3 years ago
- A simple, intuitive and Efficient single cell binary Data Storage formatβ15Oct 10, 2019Updated 6 years ago
- B-cell repertoire and clonal family tree explorerβ18Updated this week
- Multimodal deep learning in neuroimagingβ14Jan 27, 2023Updated 3 years ago
- Trans-association between HLA and TCR-CDR3β19Mar 29, 2023Updated 2 years ago
- A deep learning approach for predicting high-confidence neoantigens by considering both the presentation possibilities of mutant peptidesβ¦β44Mar 25, 2023Updated 2 years ago
- Probabilistic HLA typingβ35Aug 31, 2019Updated 6 years ago
- Scripts for reproducing analyses of large RNA-seq datasetsβ15May 22, 2019Updated 6 years ago
- Bioinformatics tool outputs converter to JSON or YAMLβ35Jun 11, 2025Updated 9 months ago
- β10Jun 9, 2020Updated 5 years ago
- A tool to examine duplicate read characteristics in a BAM fileβ12Dec 8, 2017Updated 8 years ago
- Studies on "Knowledge Graph Curation with Deep Learning and Semantic Reasoning"β13Sep 10, 2021Updated 4 years ago
- Integrating Clinical Knowledge into Concept Bottleneck Models (MICCAI2024)β15Sep 12, 2024Updated last year
- Software for Ontogenic aNalysis of Antibody Repertoiresβ19Sep 25, 2025Updated 5 months ago
- An R package for correcting p-values for multiple hypothesis testing in comparative quantitative omics experiments using permutation-baseβ¦β12Mar 11, 2026Updated last week
- viewtab, csvsql, and a range of utility classes for ML and data analysis.β34Sep 21, 2022Updated 3 years ago
- Open Targets Genetics UIβ15Jan 31, 2025Updated last year
- Clinical Variant Annotation Pipelineβ10Apr 21, 2020Updated 5 years ago
- a toolset for efficient analysis of 10X Genomics linked read data sets, in particular for de novo assemblyβ15Nov 27, 2019Updated 6 years ago