Alternatives and similar repositories for compbio

Users that are interested in compbio are comparing it to the libraries listed below

• waldronlab / curatedTCGAData
  Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects
  ☆44Updated 2 months ago
• leekgroup / recount
  R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/
  ☆41Updated 7 months ago
• biodatascience / compbio_src
  Introduction to Computational Biology - source Rmarkdown files
  ☆55Updated 8 months ago
• brentp / 450k-analysis-guide
  A Practical (And Opinionated) Guide To Analyzing 450K Data
  ☆35Updated 10 years ago
• Bioconductor / BuildABiocWorkshop
  Template for building a bioconductor workshop package using github actions
  ☆20Updated 2 weeks ago
• omicsCore / SEQprocess
  SEQprocess: a modularized and customizable pipeline framework for NGS processing in R package
  ☆17Updated 5 years ago
• stephaniehicks / bioconductorNotes
  My notes/usage examples for various Bioconductor packages
  ☆15Updated 8 years ago
• Bioconductor / BiocWorkshops
  2018 Bioconductor Workshops
  ☆76Updated 6 years ago
• lgatto / tidies
  A Grammar of Data Manipulation for Omics Data
  ☆21Updated 4 years ago
• lcolladotor / biocthis
  Automate package and project setup for Bioconductor packages
  ☆53Updated 3 months ago
• Bohdan-Khomtchouk / shinyheatmap
  Web application for enormous biological heatmaps
  ☆66Updated 4 years ago
• waldronlab / cBioPortalData
  Integrate the cancer genomics portal, cBioPortal, using MultiAssayExperiment
  ☆33Updated 2 weeks ago
• kmezhoud / bioCancer
  A Shiny App for Interactive Multi-OMICS Cancer Data Visualization and analysis
  ☆21Updated last year
• csoneson / ExploreModelMatrix
  Explore design matrices interactively with R/Shiny
  ☆37Updated 3 months ago
• federicomarini / GeneTonic
  Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail
  ☆78Updated 2 months ago
• federicomarini / pcaExplorer
  pcaExplorer - Interactive exploration of Principal Components of Samples and Genes in RNA-seq data
  ☆56Updated 2 months ago
• waldronlab / TCGAutils
  Toolbox package for organizing and working with TCGA data
  ☆28Updated this week
• leekgroup / networks_correction
  Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"
  ☆16Updated 6 years ago
• waldronlab / MultiAssayExperiment
  Bioconductor package for management of multi-assay data
  ☆72Updated 2 months ago
• lindsayrutter / bigPint
  Bioconductor package that makes BIG data pint-sized.
  ☆21Updated last year
• jorainer / ensembldb
  This is the ensembldb development repository.
  ☆35Updated 10 months ago
• abbvie-external / OmicNavigator
  Open-Source Software for Omic Data Analysis and Visualization
  ☆35Updated last month
• OSU-BMBL / IRIS
  A Shiny web server for interactive visualization and analysis of RNA-seq data
  ☆23Updated 4 years ago
• waldronlab / ProjectAsPackage
  Demonstration of the use of an R package to organize a data analysis project
  ☆21Updated 5 years ago
• datacarpentry / genomics-r-intro
  Intro to R and RStudio for Genomics
  ☆30Updated last week
• brennanpincardiff / drawProteins
  Creating package to draw proteins from Uniprot API
  ☆34Updated last year
• stemangiola / bioc_2020_tidytranscriptomics
  Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap
  ☆26Updated 4 years ago
• yan-cri / DEApp
  DEAPP shiny App
  ☆30Updated 3 years ago
• Bioconductor / BiocIntro
  Course material for introductory R / Bioconductor courses
  ☆44Updated 2 years ago
• LTLA / basilisk
  Clone of the Bioconductor repository for the basilisk package.
  ☆28Updated last month