BioComputingUP / CAFA-evaluatorLinks
A Python Tool for Benchmarking Ontological Classification Methods
☆49Updated last month
Alternatives and similar repositories for CAFA-evaluator
Users that are interested in CAFA-evaluator are comparing it to the libraries listed below
Sorting:
- DeepGO with Fuzzy DL☆31Updated 3 years ago
- Fast and accurate protein function prediction from sequence through pretrained language model and homology-based label diffusion☆45Updated last year
- Protein language model trained on coding DNA☆53Updated last year
- ☆76Updated last year
- RiboNucleic Acid (RNA) Language Model☆150Updated 3 months ago
- Neural Networks for Protein Sequence Alignment☆135Updated last year
- ☆109Updated 2 years ago
- Modelling the Language of Life - Deep Learning Protein Sequences☆122Updated 5 years ago
- ☆110Updated 3 years ago
- Multi-task and masked language model-based protein sequence embedding models.☆104Updated 4 years ago
- ☆36Updated last year
- ☆19Updated last year
- Universal Structure Alignment of Monomeric and Complex Structure of Nucleic Acids and Proteins☆170Updated 9 months ago
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆88Updated last year
- Modelling the Language of Life - Deep Learning Protein Sequences☆75Updated 5 years ago
- Using Transformer protein embeddings with a linear attention mechanism to make SOTA de-novo predictions for the subcellular location of p…☆75Updated 2 years ago
- ☆121Updated last year
- Biological prediction models made simple.☆48Updated last week
- Repository for mRNA Paper and CodonBERT publication.☆141Updated last year
- Public repository describing training and testing of AntiBERTa.☆61Updated 2 years ago
- ☆60Updated 3 years ago
- ☆52Updated last year
- Evolutionary velocity with protein language models☆95Updated last month
- A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions☆106Updated 2 weeks ago
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆127Updated 2 months ago
- Finetuning ProGen2 protein language model for generation of protein sequences from selected protein families.☆85Updated 11 months ago
- RNA Multiple Sequence Alignment☆47Updated 2 years ago
- ☆77Updated last year
- Compressing protein structures effectively with torsion angles☆185Updated last month
- Fast deep learning methods for large-scale protein-protein interaction screening☆114Updated 5 months ago