Visualize the inner workings of RNA bioinformatics algorithms for structure prediction, interaction prediction and sequence alignment.
☆40Feb 28, 2024Updated 2 years ago
Alternatives and similar repositories for RNA-Playground
Users that are interested in RNA-Playground are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python implementation of Nussinov RNA folding algorithm and recursive backtrack.☆10Oct 29, 2020Updated 5 years ago
- Protocol of the analysis of iTRAQ/TMT proteomics data including quantification, statistical analysis and maybe clustering☆12May 4, 2019Updated 7 years ago
- A hierarchical deep learning framework for ncRNA-protein interaction prediction.☆14Nov 25, 2022Updated 3 years ago
- Comprehensive and scalable differential splicing analyses☆18Dec 19, 2025Updated 9 months ago
- Parallel solution for local RNA secondary structure analysis☆12Feb 14, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Python Scripts for Bioinformatics☆15Apr 24, 2024Updated 2 years ago
- LAVA (LAMP Assay Versatile Analysis) is an extendable open-source Loop-mediated isothermal AMPlification (LAMP)☆20Aug 24, 2023Updated 3 years ago
- A Framework to call Structural Variants from NGS based datasets☆22Jan 22, 2018Updated 8 years ago
- Known and Novel IsoForm Explorer. Statistically based splicing detection for circular and linear isoforms☆33Jul 14, 2017Updated 9 years ago
- An official implementation of Protein Representation Learning via Knowledge Enhanced Primary Structure Reasoning☆28Jul 14, 2023Updated 3 years ago
- ANN4EEG is a convolutional neural network toolkit for EEG-mediated drug-target interaction prediction. This approach for drug-target inte…☆13Feb 15, 2024Updated 2 years ago
- circtools: a modular, python-based framework for circRNA-related tools that unifies several functionalities in a single, command line dri…☆30Dec 19, 2023Updated 2 years ago
- This is small practice to location and detect the fog exponent.☆13May 9, 2021Updated 5 years ago
- Predicting dynamic cellular protein-RNA interactions using deep learning and in vivo RNA structure☆70Mar 3, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A comprehensive analysis tool for Ribo-seq and small RNA-seq data☆10Jun 22, 2020Updated 6 years ago
- i2dash: interactive and iterative dashboards.☆10Sep 5, 2023Updated 3 years ago
- CLI utility to post files and command output to discord☆16Oct 9, 2021Updated 4 years ago
- A textbook on population genetics☆18Aug 18, 2026Updated last month
- (No maintenance) Detect gene fusion directly from raw fastq files☆25Aug 13, 2017Updated 9 years ago
- Perl scripts for analysis RIC-seq data☆11Feb 6, 2020Updated 6 years ago
- ☆13Jan 8, 2026Updated 8 months ago
- Model to predict kinase-ligand pKi values.☆12Jul 6, 2023Updated 3 years ago
- Calculate the dn/ds (also pn and ps) value of cds☆14Jul 11, 2020Updated 6 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Transcription Factor Binding Prediction from ATAC-seq and scATAC-seq with Deep Neural Networks☆30Updated this week
- These are scripts that I use frequently in genome annotation projects. Some of them have evolved awkwardly so the code is difficult to fo…☆16Nov 20, 2017Updated 8 years ago
- LncADeep is an ab initio lncRNA identification and functional annotation tool based on deep learning☆29Jun 4, 2018Updated 8 years ago
- ☆30Nov 6, 2022Updated 3 years ago
- A textbook for phylogenetic comparative methods.☆43Sep 20, 2019Updated 7 years ago
- the codes for paper "IIFDTI: predicting drug target interaction through interactive and independent features based on attention mechanism…☆11Apr 7, 2022Updated 4 years ago
- Workflow for Sequenza, cellularity and ploidy☆28Jun 11, 2026Updated 3 months ago
- workshop website on readthedocs☆24Jun 1, 2026Updated 3 months ago
- End-to-end deep learning toolkit for predicting protein binding sites and motifs.☆45Feb 26, 2019Updated 7 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- AttentionDTA: prediction of drug–target binding affinity using attention model.https://ieeexplore.ieee.org/abstract/document/8983125☆13Aug 29, 2020Updated 6 years ago
- ☆17Aug 13, 2026Updated last month
- Package for analyzing RNA crosslinking and proximity ligation data (PARIS and beyond)☆13Mar 7, 2024Updated 2 years ago
- This tool designs guides for use with the base editor technology.☆12Aug 11, 2023Updated 3 years ago
- ☆11Jul 13, 2018Updated 8 years ago
- WeGene White Papers☆11Apr 1, 2016Updated 10 years ago
- Filters for Next Generation Sequencing☆13Oct 31, 2024Updated last year