Alternatives and similar repositories for EvoGeneX

Users that are interested in EvoGeneX are comparing it to the libraries listed below

• ncbi / ribovore
  ☆16Updated 3 months ago
• BaderLab / EnrichmentMapApp
  The EnrichmentMap Cytoscape App allows you to visualize the results of gene-set enrichment as a network.
  ☆34Updated 8 months ago
• ncbi / cwl-ngs-workflows-cbb
  A set of CWL tools and workflows used by NCBI Computational Biology Branch for NGS data analysis
  ☆24Updated last year
• AstraZeneca / Omicsfold
  Multi-omics data normalisation, model fitting and visualisation.
  ☆25Updated 2 years ago
• ncbi / elastic-blast-demos
  ElasticBLAST demos
  ☆9Updated 3 years ago
• nf-core / viralintegration
  Analysis pipeline for the identification of viral integration events in genomes using a chimeric read approach.
  ☆17Updated 3 weeks ago
• shuzhao-li / BTM
  Blood Transcription Modules for interpreting blood transcriptomics data
  ☆10Updated 7 months ago
• drostlab / metablastr
  Seamless Integration of BLAST Sequence Searches in R
  ☆31Updated last year
• lawremi / rtracklayer
  R interface to genome annotation files and the UCSC genome browser
  ☆33Updated 3 months ago
• BorgwardtLab / networkGWAS
  Method for performing genome-wide association like studies on neighborhoods identified on biological networks relevant for the phenotype …
  ☆15Updated 2 years ago
• ISCB-Academy / Elements-of-Style-Reproducible-Workflow-Creation-Maintenance-Tutorial
  ☆19Updated 2 years ago
• EvaYiwenWang / Managing_batch_effects
  ☆13Updated 2 years ago
• Xinglab / IRIS
  IRIS: Isoform peptides from RNA splicing for Immunotherapy target Screening
  ☆24Updated 10 months ago
• Accio / KEGGgraph
  The KEGGgraph package to parse KEGG pathways in R into graph objects
  ☆14Updated 2 months ago
• pnnl / leapR
  ☆17Updated 2 weeks ago
• pathwayforte / pathway-forte
  A Python package for benchmarking pathway database with functional enrichment and classification methods
  ☆13Updated 4 years ago
• mohimanilab / MetaMiner
  a metabologenomic pipeline integrating metabolomic and genomic data to identify novel RiPPs and their BGCs
  ☆13Updated 3 years ago
• alosdiallo / DNA_Rchitect
  A Shiny App for visualizing genomic data
  ☆19Updated 3 years ago
• datapplab / pathview
  pathway based data integration and visualization
  ☆41Updated 3 months ago
• sunshanwen / BP4RNAseq
  An automated pipe for reproducible RNA-seq analysis with the minimal efforts from researchers. You only need to provide the taxa name and…
  ☆14Updated 3 years ago
• moosa-r / rbioapi
  rbioapi: User-Friendly R Interface to Biologic Web Services' API
  ☆22Updated 4 months ago
• dsurujon / ShinyOmics
  Exploration of Omics data
  ☆25Updated 4 years ago
• lifebit-ai / dry-bench-skills-for-researchers
  Learning resources originally for a class held December 2020 "Dry bench skills for Researchers". Expanding based upon mini-courses.
  ☆11Updated 3 years ago
• snakemake / snakemake-workflow-catalog
  A statically generated catalog of available Snakemake workflows
  ☆34Updated this week
• drisso / RUVSeq
  Clone of the Bioconductor repository for the RUVSeq package, see https://bioconductor.org/packages/devel/bioc/html/RUVSeq.html for the of…
  ☆14Updated 2 years ago
• ncbi / BAMscale
  BAMscale is a one-step tool for either 1) quantifying and normalizing the coverage of peaks or 2) generated scaled BigWig files for easy …
  ☆69Updated 6 months ago
• TheJacksonLaboratory / weinstock_full_length_16s
  Code referenced in the manuscript 'The 16S rRNA gene for species and strain-level microbiome analysis'
  ☆10Updated 5 years ago
• jbloomlab / phydms
  phylogenetic analyses informed by deep mutational scanning data
  ☆14Updated last year
• Bioconductor / BuildABiocWorkshop
  Template for building a bioconductor workshop package using github actions
  ☆20Updated this week
• ncbi / pm4ngs
  Project Manager for NGS data analysis
  ☆31Updated 2 years ago