ncbi / EvoGeneX
This repository contains the source code of the R package for EvoGeneX, a software to infer the mode of evolution from the gene expression data.
☆17Updated 2 years ago
Related projects ⓘ
Alternatives and complementary repositories for EvoGeneX
- rbioapi: User-Friendly R Interface to Biologic Web Services' API☆17Updated 7 months ago
- R interface to genome annotation files and the UCSC genome browser☆29Updated 2 months ago
- The EnrichmentMap Cytoscape App allows you to visualize the results of gene-set enrichment as a network.☆32Updated last month
- Multi-omics data normalisation, model fitting and visualisation.☆24Updated last year
- Template for building a bioconductor workshop package using github actions☆19Updated 4 months ago
- A Python package for benchmarking pathway database with functional enrichment and classification methods☆13Updated 3 years ago
- Seamless Integration of BLAST Sequence Searches in R☆31Updated last year
- ☆19Updated 2 years ago
- Cancer Dependency Map package☆24Updated 2 months ago
- The vignette provided has a basic sketch of the steps we interactively will go through to build a package with devtools, explains version…☆11Updated 4 years ago
- A set of CWL tools and workflows used by NCBI Computational Biology Branch for NGS data analysis☆22Updated last year
- FELLA: an R package for Metabolomics data enrichment through diffusion☆21Updated 3 years ago
- Method for performing genome-wide association like studies on neighborhoods identified on biological networks relevant for the phenotype …☆14Updated last year
- R package implementing a simple method for CD8 T cell epitope prediction by MHC class I binding for HLA and other MHC-I molecules.☆15Updated 4 years ago
- Public data resources and Bioconductor: The goal of this workshop is to introduce Bioconductor packages for finding, accessing, and using…☆14Updated 3 years ago
- Luslab nextflow modules☆14Updated 3 years ago
- Tools Databases Resources in Metabolomics & Integrated Omics in 2015-2016☆12Updated 4 years ago
- An automated pipe for reproducible RNA-seq analysis with the minimal efforts from researchers. You only need to provide the taxa name and…☆12Updated 2 years ago
- A Snakemake pipeline for quality control and reproducible processing of chromatin profiling data☆19Updated 3 years ago
- ☆26Updated 3 weeks ago
- A collection of open source bioinformatics tools developed and used by Addgene.☆9Updated last month
- A pipeline for making SWIft Genomes in a Graph (SWIGG) using k-mers☆21Updated 4 years ago
- NASQAR: A web-based platform for High-throughput sequencing data analysis and visualization☆30Updated 4 years ago
- The Cancer bioMarker Prediction Pipeline (CAMPP)☆17Updated 4 years ago
- Project Manager for NGS data analysis☆27Updated 2 years ago
- Toolbox package for organizing and working with TCGA data☆23Updated 2 weeks ago
- ☆13Updated last year
- NHC: A computational approach to detect physiological homogeneity in the midst of genetic heterogeneity☆10Updated 9 months ago
- Software used by Trinity CTAT for building CTAT Genome Libs, resource databases shared by Trinity CTAT components☆10Updated last year
- Efficient manipulation of biological strings☆57Updated last week