tiagolbiotech / NPOmix_pythonLinks
☆14Updated 2 years ago
Alternatives and similar repositories for NPOmix_python
Users that are interested in NPOmix_python are comparing it to the libraries listed below
Sorting:
- Untargeted metabolomics workflow for large-scale data processing and analysis implemented in Snakemake☆30Updated 11 months ago
- Public Workflows at GNPS☆64Updated last year
- MS2Query - machine learning assisted library querying of MS/MS spectra☆53Updated last month
- Dashboard for analysis of liquid chromatography (tandem) mass spectrometry data.☆33Updated last month
- A machine learning model for the prediction of optimal growth temperature of microorganisms and enzyme catalytic optima☆62Updated 5 years ago
- ☆20Updated 2 years ago
- ☆12Updated last year
- FBMN-STATS: A hitchhiker's guide to statistical analysis of Feature-based Molecular Networks☆42Updated 6 months ago
- Bottom-up MS/MS interrogation & Experiment-specific global annotation☆30Updated last year
- Using MASST or fastMASST, adding metadata onto a tree ontology for microbes☆21Updated 3 weeks ago
- ☆29Updated last year
- UniProt Id Mapping through API☆36Updated 3 months ago
- A global network optimization approach for untargeted LC-MS metabolomics data annotation and metabolite discovery☆50Updated 2 years ago
- Molecular formula discovery via bottom-up MS/MS interrogation☆14Updated last year
- A python framework for microbial natural products data mining by integrating genomics and metabolomics data☆22Updated last week
- Hierarchical orderings for mass spectrometry data. Canonically pronounced "chemis-tree".☆30Updated 2 years ago
- A brief, quick and dirty introduction to Sequence Similarity Networks☆32Updated 3 years ago
- BiGMeC - Biosynthetic Gene cluster Metabolic pathway Constructor☆16Updated 2 years ago
- a python package for molecular formula analysis in MS-based small molecule studies☆32Updated 5 months ago
- Calculates pairwise sequence identity, similarity and normalized similarity score of proteins in a multiple sequence alignment.☆18Updated last year
- BGC Detection and Classification Using Deep Learning☆157Updated 2 years ago
- Metabolome Annotation Workflow☆26Updated last month
- scripts for predicting natural product activity from biosynthetic gene cluster sequences☆24Updated 3 months ago
- An R package to calculate indices and theoretical physicochemical properties of peptides and protein sequences.☆94Updated last year
- ☆15Updated 3 years ago
- The Mass Spec Query Language (MassQL) is a domain specific language meant to be a succinct way to express a query in a mass spectrometry …☆55Updated 2 weeks ago
- Multi-class signal peptide prediction and structure decoding model.☆102Updated 10 months ago
- This repository contains teaching material for the 3rd International Summer School on Non-Targeted Metabolomics Data Mining for Biomedica…☆12Updated 2 years ago
- snakemake pipeline for creating trees from sequence sets☆93Updated 2 months ago
- MSA(Multiple Sequence Alignment) visualization python package for sequence analysis☆170Updated last year