OHDSI / ETL-SyntheaLinks
A package supporting the conversion from Synthea CSV to OMOP CDM
☆113Updated 4 months ago
Alternatives and similar repositories for ETL-Synthea
Users that are interested in ETL-Synthea are comparing it to the libraries listed below
Sorting:
- Usagi is an application to help create mappings between coding systems and the Vocabulary standard concepts.☆98Updated last year
- Course materials for OHDSI ETL tutorial☆48Updated 8 months ago
- A tool to help improve data quality standards in observational data science.☆164Updated 6 months ago
- Web application for distributing and browsing the Standardized Vocabularies for all instances of an OMOP CDM☆63Updated 4 months ago
- Workproducts to ETL CMS datasets into OMOP Common Data Model☆100Updated 3 years ago
- Oncology Working Group Repository☆57Updated 3 weeks ago
- [under development] Tools for ETL into OMOP CDM and deployment of OHDSI toolstack☆37Updated last year
- OHDSI WebAPI contains all OHDSI services that can be called from OHDSI applications☆138Updated this week
- Broadsea deploys the core OHDSI technology stack (Atlas & R Hades), using cross-platform Docker container technology.☆82Updated 3 months ago
- Automated Characterization of Health Information at Large-scale Longitudinal Evidence Systems (ACHILLES) - descriptive statistics about a…☆140Updated 2 weeks ago
- ATLAS is an open source software tool for researchers to conduct scientific analyses on standardized observational data☆287Updated 2 weeks ago
- ETL-CDMBuilder is a repo containing a .NET Core application to perform ETL to OMOP CDM for multiple databases☆53Updated this week
- WhiteRabbit is a small application that can be used to analyse the structure and contents of a database as preparation for designing an E…☆193Updated 3 months ago
- Repository for OMOP CDM conventions as defined by THEMIS. These can be reference lists of concepts, pieces of standardized code for data …☆28Updated 8 months ago
- Build process for the OHDSI Standardized Vocabularies. Currently not available as independent release.☆244Updated this week
- Leaf Clinical Data Explorer☆91Updated 3 months ago
- [Under development] A dbt ETL project to convert a Synthea synthetic data set into the OMOP CDM☆29Updated 2 weeks ago
- Tools that make it easier to use FHIR® and clinical terminology within data analytics, built on Apache Spark.☆105Updated last week
- ☆25Updated 5 months ago
- Main OMOPonFHIR Settings☆46Updated 3 years ago
- ETL Tool for converting datasets to OMOP CDM☆33Updated 2 years ago
- HEDIS FHIR-based Quality Reporting☆29Updated 5 years ago
- MIMIC (Medical Information Mart for Intensive Care) is a large, single-center database comprising information relating to patients admitt…☆80Updated 2 weeks ago
- ☆27Updated 7 years ago
- Virtual Machine containing SynPUF data in OMOP CDM, a RDBS including query client, WebAPI, ATLAS, R and Python.☆55Updated 4 years ago
- An R package for performing patient level prediction in an observational database in the OMOP Common Data Model.☆199Updated last month
- Open source clinical text de-identification☆131Updated 10 months ago
- Runs CQL phenotype definitions against an OMOP repository☆12Updated 2 years ago
- Mapping the MIMIC-III database to the OMOP schema☆139Updated last year
- Python package for managing OHDSI clinical data models. Includes support for LLM based plain text queries!☆45Updated 3 weeks ago