Web application for distributing and browsing the Standardized Vocabularies for all instances of an OMOP CDM
☆72Aug 28, 2025Updated 6 months ago
Alternatives and similar repositories for Athena
Users that are interested in Athena are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ATLAS is an open source software tool for researchers to conduct scientific analyses on standardized observational data☆308Mar 16, 2026Updated last week
- OHDSI WebAPI contains all OHDSI services that can be called from OHDSI applications☆146Mar 16, 2026Updated last week
- Definition and DDLs for the OMOP Common Data Model (CDM)☆1,026Nov 5, 2025Updated 4 months ago
- Automated Characterization of Health Information at Large-scale Longitudinal Evidence Systems (ACHILLES) - descriptive statistics about a…☆146Dec 2, 2025Updated 3 months ago
- Virtual Machine containing SynPUF data in OMOP CDM, a RDBS including query client, WebAPI, ATLAS, R and Python.☆58Mar 7, 2021Updated 5 years ago
- Usagi is an application to help create mappings between coding systems and the Vocabulary standard concepts.☆108May 28, 2024Updated last year
- This is an R package and Java library for rendering parameterized SQL, and translating it to different SQL dialects.☆86Oct 13, 2025Updated 5 months ago
- Workproducts to ETL CMS datasets into OMOP Common Data Model☆103Mar 19, 2022Updated 4 years ago
- Broadsea deploys the core OHDSI technology stack (Atlas & R Hades), using cross-platform Docker container technology.☆90Jan 5, 2026Updated 2 months ago
- ☆12May 30, 2025Updated 9 months ago
- An R package for performing various cohort diagnostics.☆49Feb 4, 2026Updated last month
- Cyclops (Cyclic coordinate descent for logistic, Poisson and survival analysis) is an R package for performing large scale regularized re…☆43Feb 27, 2026Updated 3 weeks ago
- WhiteRabbit is a small application that can be used to analyse the structure and contents of a database as preparation for designing an E…☆208Dec 25, 2025Updated 3 months ago
- The OHDSI repository to provide comprehensive evidence for the covid-19☆13Jan 13, 2021Updated 5 years ago
- [under development] Tools for ETL into OMOP CDM and deployment of OHDSI toolstack☆39Nov 10, 2023Updated 2 years ago
- The Mohawk College MARC-HI/MEDIC Client Registry Reference Implementation represents the prototype Client Registry (Enterprise Master Pat…☆14May 31, 2023Updated 2 years ago
- Clinical Research Informatics☆13Aug 23, 2023Updated 2 years ago
- MIMIC (Medical Information Mart for Intensive Care) is a large, single-center database comprising information relating to patients admitt…☆88Feb 12, 2026Updated last month
- Oncology Working Group Repository☆61Dec 31, 2025Updated 2 months ago
- Main OMOPonFHIR Settings☆47Feb 11, 2022Updated 4 years ago
- [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis☆35Jan 2, 2024Updated 2 years ago
- A tool to help improve data quality standards in observational data science.☆175Feb 6, 2026Updated last month
- ETL-CDMBuilder is a repo containing a .NET Core application to perform ETL to OMOP CDM for multiple databases☆54Jan 28, 2026Updated last month
- Python package for machine learning for healthcare using a OMOP common data model☆110Jun 17, 2023Updated 2 years ago
- Snow Owl Terminology Server. This version is no longer maintained. Please use the upstream version or the alternate Snowstorm Terminology…☆11Feb 11, 2020Updated 6 years ago
- An R package that facilitates access to a variety of OMOP CDM sample data sets.☆46May 22, 2025Updated 10 months ago
- This is an R package that implements a library of standard queries that run against the OMOP-CDM.☆18Jun 7, 2024Updated last year
- Hephaestus - ETL and ML tools for OHDSI - OMOP CDM☆13Sep 18, 2025Updated 6 months ago
- Semantic Web Services Integration for Biomedical Applications☆12Jul 11, 2017Updated 8 years ago
- Tools for working with icd codes and comorbidities☆26Apr 28, 2021Updated 4 years ago
- demonstration of how to access provider directory (NPPES) via FHIR services☆16Aug 20, 2018Updated 7 years ago
- Cohort definition Application Programming in R☆21Mar 13, 2026Updated last week
- Interactive web site for reviewing the results of the Achilles R package.☆18Dec 30, 2022Updated 3 years ago
- Conversion from FHIR HL7 to OMOP CDM☆19Jan 29, 2025Updated last year
- Mapping the MIMIC-III database to the OMOP schema☆143Mar 17, 2024Updated 2 years ago
- An R package for performing patient level prediction using deep learning in an observational database in the OMOP Common Data Model.☆14Mar 10, 2026Updated 2 weeks ago
- Building data processing pipelines for documents processing with NLP using Apache NiFi and related services☆57Mar 17, 2026Updated last week
- kmdata: A Database of Reconstructed Individual Patient Level Data from 153 Oncology Clinical Trials☆15May 27, 2025Updated 9 months ago
- Health Analytics Data-to-Evidence Suite (HADES): A collection of R packages for performing analytics against the Common Data Model.☆27Mar 6, 2026Updated 2 weeks ago