A python package for removing duplicate text in clinical notes or other documents
☆39Aug 6, 2020Updated 6 years ago
Alternatives and similar repositories for bloatectomy
Users that are interested in bloatectomy are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- This repository contains the complete source code of the MedTAG annotation tool. MedTAG is a biomedical annotation tool for tagging biome…☆12Jan 1, 2023Updated 3 years ago
- Cross-domain data integration for named entity disambiguation in biomedical text☆11Dec 15, 2021Updated 4 years ago
- A comprehensive NLP preprocessing package for clinical notes sentence boundary detection, tokenization☆32May 22, 2024Updated 2 years ago
- Resources for the Society of Critical Care Medicine (SCCM) Datathon☆25Sep 24, 2024Updated 2 years ago
- Dataset containing 7,025 discharge summary notes from the MIMIC III dataset annotated for 7 SBDHs☆20Jun 18, 2022Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Efficient Symptom Inquiring and Diagnosis via Adaptive Alignment of Reinforcement Learning and Classification [AI in Medicine Journal]☆14May 20, 2022Updated 4 years ago
- Code for the EACL 2021 Paper: Clinical Outcome Prediction from Admission Notes using Self-Supervised Knowledge Integration☆99Jul 31, 2024Updated 2 years ago
- This project develops compact transformer models tailored for clinical text analysis, balancing efficiency and performance for healthcare…☆18Mar 26, 2024Updated 2 years ago
- Developer project for getting basic API integrations working in under 5 minutes☆11May 22, 2026Updated 4 months ago
- Code and website related to the eICU Collaborative Research Database☆408Dec 19, 2024Updated last year
- This repository contains a corpus of medical case reports with entity and relation annotations in BioC format.☆19Jan 16, 2020Updated 6 years ago
- A distributed version of the sparse multi-output Gaussian process framework integrating python and C++.☆30Feb 21, 2018Updated 8 years ago
- ☆18Oct 30, 2020Updated 5 years ago
- Back end for producing indicators and loading them into the COVIDcast API.☆12Sep 18, 2026Updated 3 weeks ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Phe2vec: Automated Disease Phenotyping based on Unsupervised Embeddings from Electronic Health Records☆24Nov 20, 2020Updated 5 years ago
- Converting irregularly spaced time series, such as eletronic health records, into dataframes for tabular classification.☆20Jun 17, 2025Updated last year
- Deep learning model for sepsis prediction using high-frequency data☆18May 5, 2019Updated 7 years ago
- Business Rule Engine☆22Updated this week
- MIMIC preprocessing for the ICML paper "Dynamic Measurement Scheduling for Event Forecasting Using Deep RL"☆19May 16, 2019Updated 7 years ago
- UMLS to SNOMED CT and ICD-10-CM mapping tool: A Python script for generating JSON files containing mappings between UMLS CUIs and SNOMED …☆16Feb 11, 2026Updated 7 months ago
- A Python library to load and analyze the MIMIC III Critical Care Database☆31Jul 16, 2026Updated 2 months ago
- ☆70Feb 27, 2021Updated 5 years ago
- Custom Keras layers for implementing multi-dimensional recurrent neural networks (MDRNNs) described in Alex Graves's paper https://arxiv.…☆10Apr 27, 2020Updated 6 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Zero-shot clinical trial matching with LLMs☆20Mar 1, 2025Updated last year
- Rare disease identification from free-text clinical notes with ontologies and weak supervision☆32May 6, 2023Updated 3 years ago
- ☆53May 2, 2021Updated 5 years ago
- PaloBoost is an overfitting-robust Gradient Boosting algorithm.☆16Dec 20, 2019Updated 6 years ago
- ☆101Feb 25, 2022Updated 4 years ago
- IPython notebooks for EEG/MEG data processing using mne-python☆29Apr 10, 2016Updated 10 years ago
- Timeseries Anomaly Detection using S-ESD and S-H-ESD☆14Jan 31, 2019Updated 7 years ago
- Code for the EMNLP paper "Improving Detection and Categorization of Task-relevant Utterances through Integration of Discourse Structure a…☆12Nov 23, 2022Updated 3 years ago
- BV2BIDS is a command line tool that creates the EEG-BIDS folder hierarchy from BVCD files.☆10Mar 9, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Implementation of the BLUE benchmark with Transformers.☆20Feb 16, 2024Updated 2 years ago
- Build a medical knowledge graph based on Unified Language Medical System (UMLS)☆28Dec 25, 2021Updated 4 years ago
- Don't worry about UMLS, RxNorm, SNOMED, or SemMedDB licensing - write code that knows how to download it automatically☆43Jun 19, 2026Updated 3 months ago
- Snowstorm Lite FHIR Terminology Server☆38Sep 25, 2026Updated 2 weeks ago
- clock_plot provides a simple way to visualize timeseries data, mapping 24 hours onto the 360 degrees of a polar plot☆15Apr 5, 2022Updated 4 years ago
- BioMedICUS: A biomedical and clinical NLP engine.☆21Oct 22, 2025Updated 11 months ago
- This repository lists papers, codes, and datasets in Biomedical Text Summarisation based on PLM☆23Oct 4, 2022Updated 4 years ago