nedap / deidentifyLinks
A Python library to de-identify medical records with state-of-the-art NLP methods.
☆141Updated 3 weeks ago
Alternatives and similar repositories for deidentify
Users that are interested in deidentify are comparing it to the libraries listed below
Sorting:
- ☆221Updated last year
- Spacy pipeline object for extracting values that correspond to a named entity (e.g., birth dates, account numbers, laboratory results)☆55Updated 3 years ago
- Weakly supervised medical named entity classification☆73Updated 2 years ago
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆85Updated 3 months ago
- Library for clinical NLP with spaCy.☆618Updated 4 months ago
- Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research☆90Updated 2 years ago
- ICD-BERT: Multi-label Classification of ICD-10 Codes with BERT (CLEF 2019)☆77Updated 2 years ago
- Robust de-identification of medical notes using transformer architectures☆56Updated 3 years ago
- Healthsea is a spaCy pipeline for analyzing user reviews of supplementary products for their effects on health.☆92Updated 4 years ago
- MedTagger is a light weight clinical NLP system built upon Apache UIMA.☆70Updated 7 months ago
- An NLP framework for clinical phenotyping. Docker | Python | Solr | OMOP. http://claritynlp.readthedocs.io/en/latest/☆108Updated last year
- ☆23Updated 3 years ago
- clinical free text de-identification software☆41Updated 7 years ago
- A Serverless Text Annotation Tool for Corpus Development☆57Updated 9 months ago
- A project for developing transformer-based models for clinical relation extraction☆130Updated 2 years ago
- A Python Natural Language Processing Toolkit for Medical Text Generation☆84Updated 6 months ago
- NER and Relation Extraction from Electronic Health Records (EHR).☆91Updated 3 years ago
- Modular, fast NLP framework, compatible with Pytorch and spaCy, offering tailored support for French clinical notes.☆149Updated last week
- Large medical text dataset curated for abbreviation disambiguation, designed for natural language understanding pre-training in the medic…☆280Updated 2 years ago
- spaCy pipeline object for negating concepts in text☆281Updated 5 months ago
- System for Medical Concept Extraction and Linking☆424Updated last year
- ☆101Updated 3 years ago
- Medical Text Mining and Information Extraction with spaCy☆439Updated 3 years ago
- A deidentifier / deidentification pipeline developed by Stanford and Penn as part of the MIDRC organization.☆96Updated 2 weeks ago
- Clinical Text Summarization with Syntax-Based Negation and Semantic Concept Identification☆21Updated 5 years ago
- Automatically exported from code.google.com/p/negex☆36Updated 3 years ago
- ☆18Updated 5 years ago
- A corpus of Biomedical papers annotated with mentions of UMLS entities.☆341Updated 4 years ago
- ☆98Updated 2 years ago
- python library for graphical and continuous representations of ICD9 and ICD10 codes☆41Updated 11 months ago