AllenCellModeling / DLITELinks
Let's infer the forces that cells generate during time series by looking at the angles they make with each other.
☆9Updated last year
Alternatives and similar repositories for DLITE
Users that are interested in DLITE are comparing it to the libraries listed below
Sorting:
- ☆10Updated last year
- LSTree is a digital organoid and lineage tree extraction workflow for light sheet movies.☆18Updated last year
- ☆20Updated last year
- Track and lineage visualization with btrack and Napari☆45Updated 7 months ago
- Process and analyze surfaces using vedo in napari.☆24Updated last year
- ExTrack MLE for diffusive noisy single-particle tracks☆13Updated last month
- Jupyter notebooks for deep lineage analysis of single-cell heterogeneity and cell cycling duration heritability.☆30Updated 4 years ago
- ☆14Updated 4 years ago
- python library for particles tracking in 2D+t and 3D+t scientific images☆15Updated last year
- napari plugin for trackastra☆13Updated 7 months ago
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆26Updated 3 months ago
- A napari plugin for clustering objects according to their properties.☆85Updated last week
- MorphoFeatures code and data☆21Updated 2 years ago
- Interacting Active Surfaces☆10Updated 2 years ago
- ☆16Updated 10 months ago
- ☆22Updated last year
- Particle tracking by solving linear assignment problem.☆52Updated this week
- Feature extraction for labeled objects in images using regionprops from scikit-image☆50Updated last month
- Tools for handling FIB-SEM data and annotations☆21Updated 2 months ago
- ☆49Updated last month
- ☆33Updated this week
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆29Updated this week
- Interactive, particle-based physics, chemistry and biology modeling and simulation environment☆23Updated this week
- Accurate and efficient spot detection for microscopy data☆76Updated last week
- 1d plotting in napari-based canvas.☆26Updated this week
- Detect morphological motifs, such as blebs, filopodia, and lamellipodia, from 3D images of surfaces, particularly images of cell surfaces…☆29Updated last month
- Pure Python library for reading NIS Elements ND2 images and metadata☆47Updated 4 months ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆26Updated last month
- dask empowered fast4dreg☆11Updated 6 months ago
- Automated mitochondrial segmentation and tracking.☆32Updated 3 years ago