deepimagej / python4deepimagejLinks
☆14Updated 4 years ago
Alternatives and similar repositories for python4deepimagej
Users that are interested in python4deepimagej are comparing it to the libraries listed below
Sorting:
- This is the repository for a Python bioimage analysis course which establishes the fundamentals of image analysis in the context of biolo…☆134Updated 5 years ago
- some useful function to get Label from ROIs and vice versa , and more!☆12Updated 2 years ago
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆26Updated 6 months ago
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆40Updated 4 months ago
- ☆20Updated last year
- Feature extraction for labeled objects in images using regionprops from scikit-image☆51Updated 3 months ago
- Open-source, GPU accelerated code for deskewing and deconvolving lattice light sheet data☆27Updated 5 years ago
- A collection of demonstration materials for MorphoLibJ.☆12Updated 2 years ago
- Accelerated Pixel and Object Classifiers (APOC)☆56Updated last month
- StarDist plugin for ImageJ☆31Updated 3 years ago
- LSTree is a digital organoid and lineage tree extraction workflow for light sheet movies.☆20Updated 2 years ago
- ☆51Updated 3 months ago
- "Defragmentation: bringing BioImage Analysts to the cloud!” training school for the new generation of bioimage analysts. Topics: workflow…☆15Updated 2 years ago
- Particle tracking by solving linear assignment problem.☆57Updated last week
- GDSC Single Molecule Light Microscopy ImageJ Plugins☆16Updated this week
- Icons describing multiple microscopy techniques, as used by https://www.epfl.ch/research/facilities/ptbiop/equipment/☆11Updated 2 years ago
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆67Updated 2 weeks ago
- A Python software library with a variety of functions for (optical) microscopy image restoration, reconstruction and analysis.☆80Updated 3 years ago
- Z-stack Depth Colorcode ImageJ FIJI plugin☆24Updated 4 years ago
- Nanoscopy library for Python (NanoPyx, the successor to NanoJ) - focused on light microscopy and super-resolution imaging☆82Updated last week
- MiC is an ImageJ plugin to compare segmentation masks☆19Updated 2 months ago
- A Python module for accessing Hamamatsu DCIMG files☆14Updated 2 years ago
- ☆10Updated 8 months ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆28Updated 3 months ago
- Lectures for a napari training course☆50Updated last year
- A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification☆23Updated 3 years ago
- A Python GUI-based framework for segmentation, tracking and cell cycle annotations of microscopy data☆178Updated this week
- Automated mitochondrial segmentation and tracking.☆33Updated 3 years ago
- Tools for distributed alignment of massive images☆86Updated 2 weeks ago
- A collection of useful python utilities from True North Intelligent Algorithms☆39Updated last week