sylvainprigent / strackingLinks
python library for particles tracking in 2D+t and 3D+t scientific images
☆15Updated last year
Alternatives and similar repositories for stracking
Users that are interested in stracking are comparing it to the libraries listed below
Sorting:
- ExTrack MLE for diffusive noisy single-particle tracks☆13Updated last month
- ☆20Updated last year
- Creating figures and animations for multi-channel images with a focus on microscopy.☆76Updated 5 months ago
- Particle tracking by solving linear assignment problem.☆52Updated this week
- A napari plugin for clustering objects according to their properties.☆85Updated last week
- Process and analyze surfaces using vedo in napari.☆24Updated last year
- Automated mitochondrial segmentation and tracking.☆32Updated 3 years ago
- Segmentation method able to detect membrane/nuclei-labelled cells with low signal-to-noise ratio and dense packing in 2D and 3D. Availabl…☆33Updated 2 months ago
- ☆49Updated last month
- Resources for teaching/preparing to teach bioimage analysis☆56Updated last week
- Course and exercises on deep learning for microscopy image analysis☆17Updated this week
- Track and lineage visualization with btrack and Napari☆45Updated 7 months ago
- A minimal dependency napari plugin giving access to scikit-image functions☆18Updated last month
- A Beginner's guide to microscopy, from sample prep to acquisition, image analysis, and data interpretation☆28Updated last week
- Materials for the "ImageJ/Fiji Level 2: Automation and batch processing using macros" course taught at the Wolfson Bioimaging Facility, U…☆12Updated 3 years ago
- 1d plotting in napari-based canvas.☆26Updated this week
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆26Updated 3 months ago
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆20Updated 6 months ago
- An Ilastik-like interactive pixel classifier.☆16Updated 9 months ago
- A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆73Updated this week
- A 3D interactivity toolbox for napari☆34Updated last month
- ☆10Updated last year
- ☆72Updated 2 weeks ago
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆39Updated last month
- ☆18Updated last month
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆29Updated last month
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆26Updated last month
- ☆29Updated last year
- A collection of Image Processing and Analysis (IPA) functions used at the Facility for Advanced Imaging and Microscopy (FAIM)☆14Updated last week
- ☆33Updated last week