Software package whose main functionality consists of an evolutionary algorithm to determine the optimal ensemble of machine learning techniques for genetic network inference based on the confidence levels and topological characteristics of its results.
☆52Apr 24, 2026Updated 4 months ago
Alternatives and similar repositories for GENECI
Users that are interested in GENECI are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Simulation and inference of gene regulatory networks based on transcriptional bursting☆13Apr 17, 2026Updated 4 months ago
- Reasoning on the response of logical signaling networks with Answer Set Programming☆15Feb 10, 2026Updated 6 months ago
- Compute a 2D embedding of a data matrix given supervised class information.☆12Dec 8, 2019Updated 6 years ago
- GFF toolkit☆16May 23, 2026Updated 3 months ago
- Debarcer: A package for De-Barcoding and Error Correction of sequencing data containing molecular barcodes☆15Apr 28, 2021Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- MirMachine, a command line tool to detect microRNA homologs in genome sequences.☆15Aug 19, 2026Updated last week
- Constrained LUmping of differential Equations☆14Sep 12, 2024Updated last year
- ChromBERT: Uncovering Chromatin State Motifs in the Human Genome using a BERT-based Approach☆12Mar 17, 2026Updated 5 months ago
- BELLA: a Computationally-Efficient and Highly-Accurate Long-Read to Long-Read Aligner and Overlapper☆53May 16, 2022Updated 4 years ago
- Optimizing blood-brain barrier permeation through Deep Reinforcement Learning for de novo drug design☆14Apr 22, 2021Updated 5 years ago
- Brain Cell Type Specific Gene Expression Analysis☆18Dec 27, 2023Updated 2 years ago
- Example code and data samples for "An experimentally validated approach to automated biological evidence generation in drug discovery usi…☆12Jan 25, 2024Updated 2 years ago
- Códigos de algumas visualizações de dados☆11Mar 15, 2024Updated 2 years ago
- Blood–Brain Barrier Penetration Prediction Enhanced by Uncertainty Estimation☆13Feb 24, 2022Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆17Nov 19, 2023Updated 2 years ago
- Workflow to prepare high accuracy single molecule consensus sequences from amplicon data using unique molecular identifiers☆35Feb 27, 2024Updated 2 years ago
- Machine learning-based approach for the inference of gene regulatory networks from expression data.☆102Sep 24, 2021Updated 4 years ago
- Phylogenetic pathway–dependent recognition of fixed substitutions and parallel mutations☆11Sep 18, 2025Updated 11 months ago
- ☆13Jun 24, 2024Updated 2 years ago
- Learn how to create and deploy an ESP high availability system using Kafka as the message broker.☆11Feb 20, 2020Updated 6 years ago
- REcombination BARcode detector.☆17Apr 2, 2024Updated 2 years ago
- A tutorial on how to annotate and interpret novel mammalian reference genomes☆29Aug 22, 2026Updated last week
- With this snakemake pipeline you can process your MPRA sequencing data (assignment and count). It is the standard MPRA pipeline of the IG…☆16Aug 6, 2026Updated 3 weeks ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- This package can be used to read image data using BioFormats into numpy arrays. It was initially created to read CZI image files, but sho…☆12May 21, 2021Updated 5 years ago
- A curated biochemical database that integrates and refines data from KEGG and ATLAS databases to support precise analyses of biochemical …☆16May 13, 2026Updated 3 months ago
- Code to reproduce "Detecting liver cancer using cell-free DNA fragmentomes☆11Nov 18, 2022Updated 3 years ago
- Chromatin ACcessibility and Transcriptomics Unifying Software☆20Oct 25, 2024Updated last year
- ☆14Jul 5, 2022Updated 4 years ago
- A tutorial on structural variant calling for short read sequencing data☆46Oct 24, 2024Updated last year
- ☆13Feb 7, 2023Updated 3 years ago
- ☆10Jul 10, 2023Updated 3 years ago
- A multi-model framework for blood-brain barrier permeability discovery☆17Jun 6, 2022Updated 4 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Code for paper "Principled feature attribution for unsupervised gene expression analysis"☆13Mar 7, 2023Updated 3 years ago
- Drug-disease proximity based therapeutic effect screening and analysis☆21Sep 8, 2017Updated 8 years ago
- ALDEx_bioc is the working directory for updating bioconductor☆32Mar 27, 2026Updated 5 months ago
- A filter algorithm with program to filter an alignment or mapping file☆12May 15, 2025Updated last year
- ☆15Jul 30, 2026Updated last month
- The SYNY pipeline investigates synteny between species by reconstructing protein clusters from gene pairs.☆53Feb 8, 2026Updated 6 months ago
- Deep transformer for predicting interchain residue-residue distances of protein complexes☆14Mar 19, 2024Updated 2 years ago