Software package whose main functionality consists of an evolutionary algorithm to determine the optimal ensemble of machine learning techniques for genetic network inference based on the confidence levels and topological characteristics of its results.
☆50Apr 24, 2026Updated 2 months ago
Alternatives and similar repositories for GENECI
Users that are interested in GENECI are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Reasoning on the response of logical signaling networks with Answer Set Programming☆15Feb 10, 2026Updated 4 months ago
- Compute a 2D embedding of a data matrix given supervised class information.☆12Dec 8, 2019Updated 6 years ago
- ☆17Dec 18, 2024Updated last year
- scBoolSeq: scRNA-Seq data binarisation and synthetic generation from Boolean dynamics☆15Aug 13, 2025Updated 10 months ago
- Brain Cell Type Specific Gene Expression Analysis☆18Dec 27, 2023Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- An ecosystem monitoring setup, ideal for growing plants indoors without user intervention.☆19Jul 25, 2022Updated 3 years ago
- The repository contains the data and the codes for the manuscript "Relational graph convolutional networks for predicting blood-brain bar…☆15May 21, 2025Updated last year
- ChromBERT: Uncovering Chromatin State Motifs in the Human Genome using a BERT-based Approach☆12Mar 17, 2026Updated 3 months ago
- Optimizing blood-brain barrier permeation through Deep Reinforcement Learning for de novo drug design☆14Apr 22, 2021Updated 5 years ago
- Blood–Brain Barrier Penetration Prediction Enhanced by Uncertainty Estimation☆13Feb 24, 2022Updated 4 years ago
- Interactive TooManyCells Trees☆14Updated this week
- ☆40Nov 11, 2025Updated 7 months ago
- An introduction to various methods/approaches for the analysis of peaks generated from ChIP-seq / CUT&RUN / ATAC-seq☆40Mar 20, 2026Updated 3 months ago
- model-based understanding of single-cell CRISPR screening☆28Dec 13, 2024Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- MBP: Multi-task Bioassay Pre-training for Protein-Ligand Binding Affinity Prediction☆21Oct 15, 2024Updated last year
- Machine learning-based approach for the inference of gene regulatory networks from expression data.☆102Sep 24, 2021Updated 4 years ago
- DRUG (Digital RNA with pertUrbation of Genes)-seq data analysis pipeline☆35Mar 19, 2025Updated last year
- Code to reproduce "Detecting liver cancer using cell-free DNA fragmentomes☆11Nov 18, 2022Updated 3 years ago
- ☆14Jul 5, 2022Updated 3 years ago
- Phylogenetic pathway–dependent recognition of fixed substitutions and parallel mutations☆11Sep 18, 2025Updated 9 months ago
- JIP Pipeline System☆19Feb 5, 2018Updated 8 years ago
- This project is meant to work as a template for a binary CNN classification problem☆13Dec 8, 2022Updated 3 years ago
- A multi-model framework for blood-brain barrier permeability discovery☆17Jun 6, 2022Updated 4 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Inference of gene dependency from RNAi screening datasets.☆19Apr 9, 2020Updated 6 years ago
- A filter algorithm with program to filter an alignment or mapping file☆12May 15, 2025Updated last year
- MYB transcription factors are one of the largest gene family in plants and control many processes. This repository provides additional ba…☆12Feb 26, 2026Updated 4 months ago
- Drug-disease proximity based therapeutic effect screening and analysis☆21Sep 8, 2017Updated 8 years ago
- Code repository for the HAYSTAC pipeline☆15Oct 25, 2024Updated last year
- ALDEx_bioc is the working directory for updating bioconductor☆31Mar 27, 2026Updated 3 months ago
- ☆15Mar 17, 2026Updated 3 months ago
- ☆30Apr 11, 2023Updated 3 years ago
- HiFi-SR is a Python-based pipeline for the detection of plant mitochondrial structural rearrangements based on the mapping of PacBio high…☆10Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A rapido and lightweight method for PGS computation☆14Apr 20, 2026Updated 2 months ago
- Chromatin ACcessibility and Transcriptomics Unifying Software☆18Oct 25, 2024Updated last year
- The SYNY pipeline investigates synteny between species by reconstructing protein clusters from gene pairs.☆53Feb 8, 2026Updated 4 months ago
- Web app for automated, systematic, and integrated RNA-seq differential expression analysis☆15May 1, 2026Updated last month
- GraphCompass: Graph Comparison Tools for Differential Analyses in Spatial Systems☆39Jul 11, 2025Updated 11 months ago
- The official code implementation for DREAMwalk in Python.☆32Jul 28, 2023Updated 2 years ago
- ☆18Apr 28, 2026Updated 2 months ago