RootPainter: Deep Learning Segmentation of Biological Images with Corrective Annotation
☆81Jul 3, 2026Updated 2 weeks ago
Alternatives and similar repositories for root_painter
Users that are interested in root_painter are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- RootPainter3D: Interactive-machine-learning enables rapid and accurate contouring for radiotherapy☆25Jun 5, 2024Updated 2 years ago
- Analysis tools for SLEAP-based plant root phenotyping.☆14Jul 7, 2026Updated 2 weeks ago
- Application to extract features from plant root images☆29Oct 21, 2025Updated 9 months ago
- Digital Imaging of Root Traits: Extract trait measurements from images of monocot and dicot roots.☆26Oct 29, 2023Updated 2 years ago
- A Python framework for structuring, processing, packaging and distributing FAIR scientific image datasets☆19Updated this week
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆11May 20, 2025Updated last year
- NWB extension to store pose estimation data☆17Updated this week
- Tools for machine learning of animal behavior☆15Mar 8, 2024Updated 2 years ago
- ☆12Dec 28, 2021Updated 4 years ago
- Sealog event logging server☆10Jul 15, 2026Updated last week
- Tools for extracting crevasse location and volume from high-resolution digital elevation models, following Chudley et al. (2025).☆13May 8, 2026Updated 2 months ago
- ☆34Jan 17, 2022Updated 4 years ago
- ☆89Mar 23, 2026Updated 4 months ago
- PEMA: a flexible Pipeline for Environmental DNA Metabarcoding Analysis of the 16S/18S rRNA, ITS and COI marker genes☆32Mar 21, 2026Updated 4 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- The Automatic Mycorrhiza Finder (AMFinder) allows for automatic computer vision-based identification and quantification of AM fungal colo…☆27Nov 3, 2023Updated 2 years ago
- FU-net: Multi-class Image Segmentation using Feedback Weighted U-net☆12Apr 3, 2023Updated 3 years ago
- A PyTorch implementation of the Exclusive Cross Entropy Loss.☆20Aug 12, 2022Updated 3 years ago
- A functional-structural plant model☆74Updated this week
- Interactive image stack viewing in jupyter notebooks based on ipycanvas and ipywidgets☆182Jan 17, 2026Updated 6 months ago
- ☆13Nov 28, 2025Updated 7 months ago
- Script for parsing and displaying node status information of the HPC Sapelo2 at UGA.☆12Nov 9, 2020Updated 5 years ago
- Sample Python scripts used in scripting guide☆19Jul 14, 2023Updated 3 years ago
- ☆24Mar 31, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- lcm-log2smat is a python utility to convert LCM log files to Matlab (.mat) or Python Pickle (.pkl) files.☆13Jan 25, 2022Updated 4 years ago
- ☆22Jun 12, 2026Updated last month
- Plant phenotyping with image analysis☆805Updated this week
- ☆14Aug 12, 2022Updated 3 years ago
- A short tutorial for developing Android apps for ROS2 Java bindings based on ros2_java and ros2_android_examples.☆16Aug 21, 2018Updated 7 years ago
- Programming for Biology Class @ CSHL 2022☆14Oct 4, 2024Updated last year
- A multi-dimensional spatial image data structure for scientific Python.☆44Aug 8, 2025Updated 11 months ago
- Deployment (and development) environment for the DURAARK system.☆22Mar 9, 2016Updated 10 years ago
- Plotting pytorch tensors made easy!☆15Jan 28, 2021Updated 5 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- 依据广西81个县早稻、晚稻作物4年产量的相关历史数据,结合4年气象降雨、温度、光照、温差等气象数据,一方面探索广西各地区气象环境局部特征,构建未来气象预测系统,另一方面挖掘气象和水稻产量的关系,构建因地制宜精准产量预测模型。☆14Sep 8, 2019Updated 6 years ago
- Co-Optimization of Tool Orientations, Kinematic Redundancy, and Waypoint Timing for Robot-Assisted Manufacturing☆19Sep 24, 2025Updated 9 months ago
- Deep Learning segmentation suite designed for 2D microscopy image segmentation☆10Dec 17, 2021Updated 4 years ago
- deck for jsconf2015 talk, "if you wish to learn e6/2015 from scratch, you must first invent the universe"☆42Jun 1, 2015Updated 11 years ago
- Templates for commonly used GitHub actions steps☆13Dec 13, 2024Updated last year
- ICEpy4D is a multi-purpose Python package for 4D Image-based Continuos monitoring of glaciers' Evolution with deep learning SfM and low-c…☆24Mar 19, 2026Updated 4 months ago
- Fast and accurate Average Genome Size and 16S rRNA gene Average Copy Number computation in metagenomic data☆16Dec 20, 2024Updated last year