RootPainter: Deep Learning Segmentation of Biological Images with Corrective Annotation
☆82Jul 3, 2026Updated last month
Alternatives and similar repositories for root_painter
Users that are interested in root_painter are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Code for the paper "Segmentation of Roots in Soil with U-Net"☆16Jan 10, 2025Updated last year
- RootPainter3D: Interactive-machine-learning enables rapid and accurate contouring for radiotherapy☆25Jun 5, 2024Updated 2 years ago
- Analysis tools for SLEAP-based plant root phenotyping.☆14Aug 22, 2026Updated last week
- Application to extract features from plant root images☆30Oct 21, 2025Updated 10 months ago
- Digital Imaging of Root Traits: Extract trait measurements from images of monocot and dicot roots.☆26Oct 29, 2023Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A Python framework for structuring, processing, packaging and distributing FAIR scientific image datasets☆19Aug 23, 2026Updated last week
- ☆11May 20, 2025Updated last year
- NWB extension to store pose estimation data☆17Aug 18, 2026Updated 2 weeks ago
- Tools for machine learning of animal behavior☆15Mar 8, 2024Updated 2 years ago
- Sealog event logging server☆10Aug 11, 2026Updated 3 weeks ago
- ☆34Jan 17, 2022Updated 4 years ago
- ☆89Mar 23, 2026Updated 5 months ago
- The Automatic Mycorrhiza Finder (AMFinder) allows for automatic computer vision-based identification and quantification of AM fungal colo…☆27Nov 3, 2023Updated 2 years ago
- A PyTorch implementation of the Exclusive Cross Entropy Loss.☆20Aug 12, 2022Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Interactive image stack viewing in jupyter notebooks based on ipycanvas and ipywidgets☆184Jul 30, 2026Updated last month
- 🐟Catalogue of Life toolkit for R☆14Nov 29, 2023Updated 2 years ago
- Sample Python scripts used in scripting guide☆19Jul 14, 2023Updated 3 years ago
- ☆24Mar 31, 2021Updated 5 years ago
- ☆15Aug 6, 2026Updated 3 weeks ago
- lcm-log2smat is a python utility to convert LCM log files to Matlab (.mat) or Python Pickle (.pkl) files.☆13Jan 25, 2022Updated 4 years ago
- Python version of the FMask Landsat Cloud Masking code☆13Apr 3, 2016Updated 10 years ago
- Service that allows data warehousing and workfow orchestration☆15Aug 10, 2026Updated 3 weeks ago
- Re-usable GitHub Action scripts☆14Jul 29, 2026Updated last month
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Plant phenotyping with image analysis☆820Updated this week
- Pairwise multilevel comparison using adonis☆82Jun 2, 2023Updated 3 years ago
- This is an R package for element cycle analysis using metagenomic data.☆48Feb 2, 2026Updated 6 months ago
- Tutorial for performing redundancy analysis☆16Oct 21, 2020Updated 5 years ago
- Programming for Biology Class @ CSHL 2022☆14Oct 4, 2024Updated last year
- A multi-dimensional spatial image data structure for scientific Python.☆44Aug 8, 2025Updated last year
- Deployment (and development) environment for the DURAARK system.☆22Mar 9, 2016Updated 10 years ago
- Plotting pytorch tensors made easy!☆15Jan 28, 2021Updated 5 years ago
- 依据广西81个县早稻、晚稻作物4年产量的相关历史数据，结合4年气象降雨、温度、光照、温差等气象数据，一方面探索广西各地区气象环境局部特征，构建未来气象预测系统，另一方面挖掘气象和水稻产量的关系，构建因地制宜精准产量预测模型。☆14Sep 8, 2019Updated 6 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A copy of RiboTaper v1.2☆10Mar 14, 2021Updated 5 years ago
- Easy Volumetric Segmentation with Deep Learning☆29Mar 30, 2026Updated 5 months ago
- The official OpenWeedLocator (OWL) toolkit☆12Oct 19, 2023Updated 2 years ago
- A modern C++ header only cdf library with Python bindings☆13Aug 19, 2026Updated last week
- ☆13Jul 15, 2022Updated 4 years ago
- Cell identification in high-resolution Spatial Transcriptomics☆16Dec 3, 2025Updated 8 months ago
- ☆25Mar 3, 2026Updated 5 months ago