Using our experimental screening dataset, we trained machine learning models to predict sgRNA activity.
☆13Oct 16, 2018Updated 7 years ago
Alternatives and similar repositories for sgRNA-cleavage-activity-prediction
Users that are interested in sgRNA-cleavage-activity-prediction are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A deep learning method for sgRNA off-target propensity prediction.☆15Mar 17, 2020Updated 6 years ago
- Code for the CRISPOR article, all data and code to create figures and analysis☆47Jul 27, 2016Updated 9 years ago
- Python module to analyse CRISPR-based libraries☆13Apr 1, 2021Updated 4 years ago
- Generalizable Cas9/sgRNA prediction models for multiple Cas9 variants☆10Jan 17, 2026Updated 2 months ago
- An ultrafast and versatile algorithm that searches for potential off-target sites of CRISPR/Cas-derived RNA-guided endonucleases.☆97Aug 31, 2022Updated 3 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- dsNickFury is for comparing a CRISPR target site against all other potential sites in a genome. Orchid is a package I'm developing to go…☆13Mar 26, 2018Updated 8 years ago
- Convert a Genbank flat file to an NCBI ptt file☆17Aug 25, 2023Updated 2 years ago
- ☆38Oct 25, 2018Updated 7 years ago
- ☆10Jul 10, 2023Updated 2 years ago
- A software tool for personalized and allele-specific CRISPR editing.☆18Feb 1, 2022Updated 4 years ago
- All source code of the crispor.org website☆88Updated this week
- A simple implementation of the paper "Disease Prediction via Graph Neural Networks".☆22Feb 3, 2021Updated 5 years ago
- bridges the log crate and indicatif to stop the progress bars and log lines from mixing up☆11Aug 24, 2024Updated last year
- Bioinformatics code for paper associated with deep diversification of AAV☆42Nov 27, 2024Updated last year
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- CNN-SVR: A deep learning approach for predicting CRISPR/Cas9 guide RNA on-target activity☆24Apr 25, 2021Updated 4 years ago
- ☆59Sep 27, 2021Updated 4 years ago
- RADAR is devised to detect and visualize all possible twelve-types of RNA editing events from RNA-seq datasets.☆20Sep 2, 2025Updated 6 months ago
- ALDEx_bioc is the working directory for updating bioconductor☆30May 1, 2025Updated 10 months ago
- Functions for compositional analysis of high throughput sequencing☆29Dec 8, 2023Updated 2 years ago
- Calculate similarity with embedding☆11Jan 22, 2022Updated 4 years ago
- Lightweight framework for structured and repeatable model validation☆11Jan 8, 2026Updated 2 months ago
- Flexible circular visualization of genome-associated data with BioPerl and SVG.☆46Jun 18, 2019Updated 6 years ago
- A collection of tools that generate and analyse side-chain rotamer libraries☆10Updated this week
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Using Machine Learning to Identify Glioblastoma patients with NF1 inactivation☆11Dec 19, 2016Updated 9 years ago
- modification of bibliotools 2.2 from Sébastian Grauwin☆12May 21, 2019Updated 6 years ago
- Primer Seek in RNA-Seq. Designs RT-PCR primers that validate alternative splicing events from RNA-Seq data.☆13Nov 27, 2016Updated 9 years ago
- pgp.ustc.edu.cn deployment☆10Mar 25, 2019Updated 7 years ago
- blend4j is a JVM partial reimplementation of the Python library bioblend for interacting with Galaxy, CloudMan, and BioCloudCentral.☆16Oct 17, 2022Updated 3 years ago
- The matching routine for interologs identification based on co-evolution☆11Jul 17, 2018Updated 7 years ago
- Haystack: Epigenetic Variability and Transcription Factor Motifs Analysis Pipeline☆46Jun 21, 2022Updated 3 years ago
- ☆21Mar 20, 2017Updated 9 years ago
- Yet Another Way to Explore☆11May 21, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- ☆14May 26, 2020Updated 5 years ago
- Software and test files for Recon: Reconstruction of Estimated Communities from Observed Numbers☆14Dec 16, 2025Updated 3 months ago
- A no hassle tool for analyzing your favorite CRISPR screen dataset!☆11Apr 16, 2021Updated 4 years ago
- Multiple Genome Viewer☆12Sep 16, 2025Updated 6 months ago
- An app to toggle on and off bionic reading in Markdown editors, to read faster and easier.☆13Feb 16, 2026Updated last month
- Whole genome focused array SNP typer☆14Feb 2, 2026Updated last month
- BAMixChecker: A fast and efficient tool for sample matching checkup☆16Jun 12, 2022Updated 3 years ago