Alternatives and similar repositories for AnnoPred

Users that are interested in AnnoPred are comparing it to the libraries listed below

• carlaml / LDpred-funct

  View on GitHub
  Here we develop the software for the method LDpredfunct described in https://www.biorxiv.org/content/early/2018/07/24/375337
  ☆18Aug 30, 2024Updated last year
• tomwhite / t1d-genetic-risk-score

  View on GitHub
  Code for calculating an individual's T1D genetic risk score from their 23andMe data
  ☆10Mar 4, 2020Updated 5 years ago
• privefl / paper-ldpred2

  View on GitHub
  Paper discribing LDpred2
  ☆16Oct 20, 2022Updated 3 years ago
• hakyimlab / PredictDBPipeline

  View on GitHub
  ☆16Dec 7, 2020Updated 5 years ago
• bvilhjal / ldpred

  View on GitHub
  ☆102Jun 26, 2022Updated 3 years ago
• RayDebashree / metaUSAT

  View on GitHub
  metaUSAT is a data-adaptive statistical approach for testing genetic associations of multiple traits from single/multiple studies using u…
  ☆21May 27, 2021Updated 4 years ago
• MeaneyLab / PRSoS

  View on GitHub
  PRS-on-SPARK
  ☆18Feb 4, 2021Updated 5 years ago
• ding-lab / BreakPointSurveyor

  View on GitHub
  A comprehensive pipeline to analyze and visualize structural variants
  ☆20Jan 28, 2020Updated 6 years ago
• mulinlab / CAUSALdb-finemapping-pip

  View on GitHub
  A GWAS fine-mapping pipeline used in CAUSALdb
  ☆27May 1, 2022Updated 3 years ago
• vatlab / varianttools

  View on GitHub
  software tool for the manipulation, annotation, selection, and analysis of variants in the context of next-gen sequencing analysis
  ☆30Jan 24, 2022Updated 4 years ago
• opain / TWAS-GSEA

  View on GitHub
  R script that performs gene-set or gene property analysis using TWAS results.
  ☆32Sep 11, 2024Updated last year
• choishingwan / PRSice

  View on GitHub
  A software package for calculating, applying, evaluating and plotting the results of polygenic risk scores
  ☆202Aug 21, 2024Updated last year
• xqwen / dap

  View on GitHub
  software package for integrative genetic association analysis
  ☆35Jul 8, 2023Updated 2 years ago
• vibansal / ancestry

  View on GitHub
  program to estimate admixture coefficients from individual genotype or sequence data
  ☆33Sep 23, 2024Updated last year
• tshmak / lassosum

  View on GitHub
  LASSO for GWAS with summary statistics
  ☆78Sep 24, 2020Updated 5 years ago
• xtonyjiang / GNOVA

  View on GitHub
  A principled framework to estimate annotation-stratified genetic covariance using GWAS summary statistics.
  ☆31Jun 4, 2024Updated last year
• pengfexue2 / lover_pic

  View on GitHub
  情人节告白，将意中人素材图片融合到主图中
  ☆10Aug 7, 2019Updated 6 years ago
• openproblems-bio / task_perturbation_prediction

  View on GitHub
  A benchmark on predicting how small molecules change gene expression in different cell types.
  ☆13Jul 4, 2025Updated 7 months ago
• Borchevkin / drv_ads1263

  View on GitHub
  ADS1263 bare-metal driver for MCUs
  ☆11May 17, 2018Updated 7 years ago
• frenkowski / Deep_Learning_for_Bacteria_Identification_using_Raman_Spectroscopy

  View on GitHub
  We apply deep learning approaches to accurately identify 30 common bacterial pathogens, achieving an average isolate-level accuracy of ov…
  ☆13Feb 27, 2021Updated 4 years ago
• Illumina / gvcfgenotyper

  View on GitHub
  A utility for merging and genotyping Illumina-style GVCFs.
  ☆33Feb 26, 2019Updated 6 years ago
• EBISPOT / GWAS_Catalog-workshop

  View on GitHub
  Training material for the GWAS Catalog REST API workshop
  ☆13May 22, 2023Updated 2 years ago
• cgmonline / cgmonline

  View on GitHub
  CGM 主站
  ☆11Mar 10, 2025Updated 11 months ago
• aerospaceresearch / CometTrails

  View on GitHub
  Dust Streams in Space
  ☆15Mar 5, 2016Updated 9 years ago
• vpalombo / PANEV

  View on GitHub
  PaNeV: an R package for a pathway-based network visualization
  ☆10Aug 25, 2025Updated 5 months ago
• GMELab / GraBLD

  View on GitHub
  an R based software package that makes polygenic traits prediction using gradient boosted and LD adjusted gene score weights.
  ☆10Apr 9, 2019Updated 6 years ago
• ruby-journal / nguyen

  View on GitHub
  Ruby library - Fill out PDF form with FDF/XFDF via pdftk
  ☆16Sep 28, 2021Updated 4 years ago
• lasigeBioTM / K-RET

  View on GitHub
  K-RET: Knowledgeable Biomedical Relation Extraction System
  ☆10Feb 22, 2025Updated 11 months ago
• KherveFitting / KherveFitting

  View on GitHub
  ☆17Jan 17, 2026Updated 3 weeks ago
• cotsapaslab / jlim

  View on GitHub
  ☆10Jan 20, 2023Updated 3 years ago
• meryemberradauwo / RamanMatch

  View on GitHub
  Application for Raman Spectroscopy Analysis
  ☆13Jan 24, 2025Updated last year
• gilienv / EssOilDB

  View on GitHub
  Restructuring of Essential Oil Database
  ☆13Sep 10, 2019Updated 6 years ago
• Joker-Jerome / UTMOST

  View on GitHub
  UTMOST (unified test for molecular signatures) is a method for cross-tissue gene expression imputation for transcriptome-wide association…
  ☆44Oct 23, 2025Updated 3 months ago
• coderanger / alfred-lulz

  View on GitHub
  ☆16Jan 12, 2018Updated 8 years ago
• Faire / build-targets-gradle-plugin

  View on GitHub
  Provides a gradle plugin for finding affected "targets" in a monorepo.
  ☆11Feb 5, 2026Updated last week
• gertvv / ictrp-retrieval

  View on GitHub
  Retrieve and normalize records from ICTRP
  ☆10May 26, 2020Updated 5 years ago
• VirtualPharmacist / vp

  View on GitHub
  Virtual Pharmacist is a web tool that interprets personal genome for the impact of genetic variation on drug response. It can take varian…
  ☆13Nov 16, 2015Updated 10 years ago
• theochem / B3clf

  View on GitHub
  Predictors for Blood-Brain Barrier Permeability with resampling strategies based on B3DB database.
  ☆13Aug 12, 2025Updated 6 months ago
• leiwei-bioinfo / MAC

  View on GitHub
  Multi-nucleotide Variation Annotation Corrector
  ☆11Dec 13, 2022Updated 3 years ago