hsulab-arc / BridgeRNADesignerLinks
Software package to design bridge RNAs as described by Durrant & Perry et al.
☆23Updated 4 months ago
Alternatives and similar repositories for BridgeRNADesigner
Users that are interested in BridgeRNADesigner are comparing it to the libraries listed below
Sorting:
- Machine learning methods for DNA sequence analysis.☆57Updated last week
- Software tool for the flexible design of pegRNAs and ngRNAs for prime editing!☆26Updated 3 years ago
- Species-aware DNA language models capture regulatory elements and their evolution☆27Updated 2 years ago
- ☆72Updated 2 months ago
- Deep learning model built to quantitatively predict the activities of developmental and housekeeping enhancers from DNA sequence in Droso…☆72Updated 2 years ago
- ClinVar Mapping and Annotation Toolkit☆20Updated last week
- Flexible analysis of high-content CRISPR screening☆31Updated 5 months ago
- ☆88Updated 2 months ago
- ☆31Updated 5 years ago
- BioInformatics Agent (BIA): Unleashing the Power of Large Language Models to Reshape Bioinformatics Workflow☆42Updated last year
- An ultrafast and versatile algorithm that searches for potential off-target sites of CRISPR/Cas-derived RNA-guided endonucleases.☆95Updated 3 years ago
- SPROUT is a machine learning tool to predict the DNA repair outcome in CRISPR experiments.☆15Updated 4 years ago
- DRUGZ software☆24Updated 4 years ago
- Visualization and analysis platform for metabolic data and network pattern recognition☆40Updated 10 months ago
- Gene.iobio vue☆69Updated 2 weeks ago
- ☆10Updated 2 years ago
- Plot multiple sequence alignment (MSA)☆16Updated last year
- DeepSomatic is an analysis pipeline that uses a deep neural network to call somatic variants from tumor-normal and tumor-only sequencing …☆289Updated 3 months ago
- Ledidi turns any machine learning model into a biological sequence editor, allowing you to design sequences with desired properties.☆100Updated last week
- Intel lab's open sourced data science framework for accelerating digital biology☆49Updated 2 weeks ago
- QUEEN: a framework to generate quinable and efficiently editable nucleotide sequence resources☆45Updated last week
- Predicting gene expression levels from genomic sequences☆54Updated 5 years ago
- ClinVar aggregates information about genomic variation and its relationship to human health. Contact us at 'clinvar@ncbi.nlm.nih.gov…☆82Updated 3 weeks ago
- Multi-Omics Peptide Generator☆30Updated 3 months ago
- ☆11Updated last year
- 🤖 Python biolab automation library: parsers, report generators, picklist simulators, and more☆46Updated 8 months ago
- CADD scripts release for offline scoring. For more information about CADD, please visit our website☆90Updated 3 months ago
- sequence-based prediction of multiscale genome structure from kilobase to whole-chromosome scale☆95Updated 11 months ago
- Code for the CRISPOR article, all data and code to create figures and analysis☆47Updated 9 years ago