dbsb-juntendo / descSPIMLinks
User-affordable and versatile light-sheet microscopy system for cleared specimens
☆25Updated 5 months ago
Alternatives and similar repositories for descSPIM
Users that are interested in descSPIM are comparing it to the libraries listed below
Sorting:
- GUI interface between napari and micromanager powered by pymmcore-plus and pymmcore-widgets☆71Updated this week
- Recipes for open microscopy☆12Updated 4 years ago
- MSSR Plugin☆13Updated 10 months ago
- Imagej toolset to ease hyperstacks visualization and handling☆22Updated 10 months ago
- A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification☆23Updated 3 years ago
- ☆51Updated 3 months ago
- The known BioVoxxel Toolbox functions now improved for 2D and 3D images☆17Updated last month
- An implementation agnostic schema for describing a sequence of events during a multi-dimensional imaging acquisition.☆19Updated 2 weeks ago
- Lectures for a napari training course☆50Updated last year
- Hardware documentation for the mesoSPIM microscope project☆34Updated last week
- ☆13Updated 5 years ago
- Running compute-intense parts of BigStitcher distributed☆26Updated last week
- Denoising via adaptive binning.☆12Updated last year
- A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆78Updated 2 weeks ago
- Handmade ImageJ / Fiji LUTs for microscopy, scientific good visualization and art.☆12Updated 7 months ago
- This is the repository for a Python bioimage analysis course which establishes the fundamentals of image analysis in the context of biolo…☆134Updated 5 years ago
- Cell tracking and segmentation software☆134Updated 2 weeks ago
- A platform for compiling, analyzing, and exploring tracking data☆47Updated last week
- Loading and handling microscopy data in blender☆130Updated last week
- Pure python/C++ micro-manager ecosystem☆42Updated last week
- Nanoscopy library for Python (NanoPyx, the successor to NanoJ) - focused on light microscopy and super-resolution imaging☆82Updated last week
- Z-stack Depth Colorcode ImageJ FIJI plugin☆24Updated 4 years ago
- Fluorescence Lifetime Ultimate Explorer (FLUTE) is a GUI for exploring and analyzing Fluorescence Lifetime Microscopy (FLIM) data☆27Updated 8 months ago
- A napari plugin to analysis point spread functions.☆13Updated 5 months ago
- Generate markdown notebooks from ImageJ Macro☆25Updated 4 years ago
- ABBA - Aligning Big Brains and Atlases (2D sections to 3D atlas registration)☆52Updated last week
- Python scripts library for Aivia. Ask your questions on the forum >>☆15Updated 2 weeks ago
- Image acquisition software for mesoSPIM light-sheet microscopes.☆43Updated last week
- Config and scripts used to run a Nikon Eclipse Ti in the vanNimwegen lab.☆22Updated last year
- A napari plugin for clustering objects according to their properties.☆87Updated this week