xmao / kobasLinks
KOBAS: a command line tool for identifying significant pathways from genomic data
☆30Updated 15 years ago
Alternatives and similar repositories for kobas
Users that are interested in kobas are comparing it to the libraries listed below
Sorting:
- 10x Genomics Linked-Read Diploid De Novo Assembler☆65Updated 6 years ago
- Plant small RNA target prediction tool☆26Updated 8 years ago
- A shiny app for TBtools data plot☆29Updated 9 years ago
- ☆89Updated 4 years ago
- A simple tool to calculate reads number and total base count in FASTQ file☆21Updated 6 years ago
- web documentation for Trinotate☆48Updated 2 years ago
- GFF3sort: A Perl Script to sort gff3 files and produce suitable results for tabix tools☆51Updated 5 years ago
- iTAK☆43Updated last year
- Simple code snippets and data for the One Flowcell - One Assembly study☆35Updated 7 years ago
- Lima - Demultiplex Barcoded PacBio Samples☆67Updated 4 months ago
- Software for clustering de novo assembled transcripts and counting overlapping reads☆73Updated 3 years ago
- Tools for working with second gen assemblies, fasta sequences, etc☆93Updated 9 years ago
- *UNOFFICIAL, UNMAINTAINED and OUTDATED*: This was an unofficial archive of GMAP-GSNAP releases. Please use the original website for curr…☆33Updated 9 years ago
- My collection of light bioinformatics analysis pipelines for specific tasks☆75Updated last year
- microRNA PREdiction From small RNA-seq data☆29Updated 7 years ago
- SQANTI2 is now replaced by SQANTI3. Please go to: https://github.com/ConesaLab/SQANTI3☆38Updated 5 years ago
- Command-line utility to color objects of a KEGG pathway with arbitrary colors☆34Updated 10 years ago
- BamDeal: a comprehensive toolkit for bam manipulation☆54Updated 2 years ago
- parallelized blat with multi-threads support☆53Updated 8 months ago
- Building SuperTranscripts: A linear representation of transcriptome data☆67Updated 4 years ago
- Coding Genome Reconstruction using Iso-Seq data☆61Updated 3 years ago
- FEELnc : FlExible Extraction of LncRNA☆90Updated 2 months ago
- Python scripts for matching output of Pacific Biosciences IsoSeq RNA-seq pipeline to an annotation file.☆23Updated 10 years ago
- BS-Seeker3: An Ultra-fast, Versatile Pipeline for Mapping Bisulfite-treated Reads.☆27Updated 6 years ago
- Genome Scripts used in fungal comparative genomics☆66Updated 5 years ago
- Pipeline for annotating genomes using long read transcriptomics data with pinfish☆28Updated 4 years ago
- UNDER DEVELOPMENT--- Analysis of long non-coding RNAs from RNA-seq datasets☆34Updated 5 months ago
- A reference viral database (RVDB)☆26Updated 6 years ago
- TADtool is an interactive tool for the identification of meaningful parameters in TAD-calling algorithms for Hi-C data.☆48Updated 2 years ago
- Toolkit for processing TAB-delimited format☆62Updated 11 months ago