Divide and Conquer BLAST: using grid engines to accelerate NCBI-BLAST+ and other sequence analysis tools
☆11Apr 26, 2020Updated 5 years ago
Alternatives and similar repositories for DCBLAST
Users that are interested in DCBLAST are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Take a list of Pacbio files (.fofn) and creates a spreadsheet for data submission to the sequuence read archive (SRA)☆12Feb 28, 2016Updated 10 years ago
- gTaxon - a fast cross-platform NCBI taxonomy data querying (gi2taxid, taxid2taxon, name2taxid, LCA) tool, with cmd client and REST API se…☆14Jul 24, 2016Updated 9 years ago
- MITE Tracker: An accurate approach to identify miniature inverted-repeat transposable elements in large genomes☆20Mar 21, 2024Updated 2 years ago
- Domain based annotation of transposable elements☆22Oct 8, 2025Updated 5 months ago
- Write Perl extensions using Wasm☆13Dec 23, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- my commonly used perl script☆19Aug 28, 2020Updated 5 years ago
- Reference genome quality scores☆20Dec 17, 2020Updated 5 years ago
- iTAK☆48May 22, 2024Updated last year
- ☆15Apr 19, 2018Updated 7 years ago
- OrthoFiller: Identifying missing annotations for evolutionarily conserved genes.☆22Dec 1, 2022Updated 3 years ago
- Annotate sequences from BLAST against KEGG DB with KO numbers and summarize them in KEGG modules.☆23Dec 27, 2018Updated 7 years ago
- Python CLI for alignment-free genomics.☆13Feb 11, 2026Updated last month
- SARS-CoV-2 genomics☆16Jun 20, 2025Updated 9 months ago
- Output FASTQ summary statistics in JSON format☆29Oct 30, 2022Updated 3 years ago
- NordVPN Threat Protection Pro™ • AdTake your cybersecurity to the next level. Block phishing, malware, trackers, and ads. Lightweight app that works with all browsers.
- Copy number estimation of highly duplicated sequences☆10Aug 15, 2017Updated 8 years ago
- catalog for long-read sequencing tools☆32Feb 14, 2023Updated 3 years ago
- A pipeline for isoseq☆23Jun 8, 2018Updated 7 years ago
- Programs implementing the trio-binning genome assembly method☆21Nov 22, 2023Updated 2 years ago
- A presentation about Mojolicious, Vue.js and Postgres☆16Oct 31, 2018Updated 7 years ago
- defusion☆14Aug 24, 2021Updated 4 years ago
- machine learning example code in PDL (Perl Data Language)☆14Jun 23, 2011Updated 14 years ago
- Singularity 101☆30Oct 17, 2019Updated 6 years ago
- 바닥부터 시작하는 R + 바이오인포☆12Nov 28, 2016Updated 9 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Phylogenetic Likelihood Library☆29Dec 3, 2020Updated 5 years ago
- Scripts and documentations on the MCSC decontamination method☆10Jun 13, 2023Updated 2 years ago
- Introduction to Cloud Foundry app deployment with Dancer2 and management concepts.☆10Jan 11, 2020Updated 6 years ago
- Communities Assembly by Traits: Individuals and beyond☆13Nov 5, 2024Updated last year
- Scripts to split reference and run mummer in parallel on an SGE cluster☆11Oct 14, 2016Updated 9 years ago
- Module to determine where repeats are and make soft-masks of said☆10Mar 14, 2024Updated 2 years ago
- Course materials for the IBioIC Introduction to Bioinformatics training course☆12Jun 4, 2017Updated 8 years ago
- Computational Framework for Genome-Wide Association Studies and Meta-Studies in C/C++ with Python Interfaces☆11Oct 31, 2020Updated 5 years ago
- The Vertebrate Genomes Project Mitogenome Assembly Pipeline☆19Mar 26, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Population genetic summary statistics☆40Sep 28, 2023Updated 2 years ago
- RNA-seq analysis scripts☆16Jan 8, 2026Updated 2 months ago
- Official Repository of the Oyster River Protocol for Transcriptome Assembly☆18Aug 12, 2021Updated 4 years ago
- A loose collection of scripts and utilities for processing and analyzing the Goat reference genome assembly☆11Feb 28, 2017Updated 9 years ago
- Code accompanying the publication for compressed graph annotation☆13Feb 14, 2019Updated 7 years ago
- Automated de novo assembly of whole chloroplast genomes.☆48Sep 23, 2024Updated last year
- Readability enhancement tool for bioinformatics data file format☆29Jan 9, 2020Updated 6 years ago