A completely automated MATLAB-based trainable image cell segmentation, fluorescence quantification and analysis suite, particularly well suited for high-throughput time lapse fluorescence microscopy of in vivo bacterial cells.
☆32Dec 1, 2020Updated 5 years ago
Alternatives and similar repositories for SuperSegger
Users that are interested in SuperSegger are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- segmentation of rod-shaped bacteria☆15Mar 25, 2023Updated 3 years ago
- Automated cell tracking package for MATLAB☆11Feb 21, 2019Updated 7 years ago
- ☆10Feb 5, 2026Updated 8 months ago
- ☆14Updated this week
- Mother machine image analysis through napari☆11Jun 6, 2026Updated 4 months ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- An automated MATLAB tool for segmentation of surface stained cells.☆28Jul 29, 2019Updated 7 years ago
- Multiple-particle tracking designed to (1) track dense particle fields, (2) close gaps in particle trajectories resulting from detection …☆56Oct 1, 2026Updated last week
- lncRNA-Py is a development package for applying machine learning and deep learning to the problem of lncRNA classification, i.e. predicti…☆12Jan 24, 2025Updated last year
- Omnipose: a high-precision solution for morphology-independent cell segmentation☆164Sep 11, 2026Updated 3 weeks ago
- Feature Selection and Extraction☆19Jul 10, 2015Updated 11 years ago
- Evaluating the quality of a cell segmentation method without reference.☆13Jul 26, 2025Updated last year
- Pair correlation function analysis of fluorescence fluctuations in big image time series.☆11Feb 25, 2026Updated 7 months ago
- Computational Testing for Automated Preprocessing - a Matlab toolbox extending EEGLAB functionality for batch processing of EEG☆22Feb 21, 2026Updated 7 months ago
- This repository is the official implementation of Bidirectional Learning for Offline Infinite-width Model-based Optimization (NeurIPS 202…☆14Jan 19, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- JAMA is a device to measure joint angles wirelessly with 9 DOF, using a microcontroller (ESP32) together with an inertial measure unit (…☆12Sep 28, 2021Updated 5 years ago
- Stack denoising autoencoder (SdA) code in "Deep learning based functional site-level and UTR-level human miRNA target prediction"☆11May 7, 2019Updated 7 years ago
- Repository for the TRANSIT and TPP tools developed by the Ioerger Lab☆23Dec 23, 2025Updated 9 months ago
- ☆19Mar 15, 2017Updated 9 years ago
- Relates to the article by Lioy, Cournac et al., Cell, 2018 (Functional partitioning of a bacterial chromosome through the interplay of nu…☆11Aug 19, 2020Updated 6 years ago
- Code of the all the data augmentation [ Based on our survey, that will soon be published ]☆10Jul 5, 2023Updated 3 years ago
- Detecting the starting frame of actions in video.☆10Feb 12, 2020Updated 6 years ago
- Scripts to perform active learning as described in the referenced article.☆13Sep 17, 2025Updated last year
- A plugin for open-ephys enabling the insertion of Cython into the open-ephys signal chain.☆11Dec 22, 2021Updated 4 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- ☆24Mar 22, 2023Updated 3 years ago
- A Python package with integrated lncRNA prediction methods☆13Feb 17, 2021Updated 5 years ago
- Cellular Mitochondrial Analysis☆16Oct 25, 2021Updated 4 years ago
- Schedules tweets using TweetDeck☆15Jan 30, 2020Updated 6 years ago
- ExTrack MLE for diffusive noisy single-particle tracks☆16Sep 18, 2026Updated 3 weeks ago
- Retrieve NvFBC Private Data (UUID) from a GeForce Experience installation☆21Apr 9, 2021Updated 5 years ago
- SplineDist: Automated Cell Segmentation with Spline Curves☆74Sep 29, 2024Updated 2 years ago
- Compute strain abundance in a defined microbial community☆10Jul 27, 2023Updated 3 years ago
- Electron-based multiplexed imaging viewer☆27Mar 12, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- SQL on CSV files in the shell☆15Apr 6, 2018Updated 8 years ago
- slncky is a tool for lncRNA discovery from RNA-Seq data. slncky filters a high-quality set of noncoding transcripts, discovers lncRNA or…☆13Apr 13, 2021Updated 5 years ago
- ☆12Nov 7, 2019Updated 6 years ago
- Python Client Package for WikiPathways☆28Sep 8, 2026Updated last month
- Ideas, code and results of the 2018 CytoData hackathon☆13Jan 23, 2024Updated 2 years ago
- A loose collections of functions to prepare plots in R☆11Nov 17, 2017Updated 8 years ago
- Genomic Features in Python from BioConductor's AnnotationHub☆22Sep 28, 2026Updated last week