wanwenzeng / ep2vecLinks
☆22Updated 8 years ago
Alternatives and similar repositories for ep2vec
Users that are interested in ep2vec are comparing it to the libraries listed below
Sorting:
- A neural network framework for predicting the Hi-C chromatin interactions from megabase scale DNA sequence☆33Updated last year
- ☆31Updated 6 years ago
- Transcription Factor Binding Prediction from ATAC-seq and scATAC-seq with Deep Neural Networks☆29Updated 7 months ago
- ☆18Updated 3 years ago
- PECA is a software for inferring context specific gene regulatory network from paired gene expression and chromatin accessibility data☆45Updated last month
- Deep neural networks for predicting CpG methylation☆37Updated 8 years ago
- Code for reproducing the Sei manuscript results☆17Updated 3 years ago
- model-based understanding of single-cell CRISPR screening☆25Updated 11 months ago
- HiCorr: a Hi-C data bias-correction pipeline☆29Updated 7 months ago
- A comprehensive tool for processing, analyzing and visulizing single cell chromatin accessibility sequencing data☆24Updated last year
- Deep Learning Method to Identify Cancer Associated TCRs☆47Updated 3 years ago
- ☆26Updated 7 months ago
- Code for the paper "Integrating regulatory DNA sequence and gene expression to predict genome-wide chromatin accessibility across cellula…☆44Updated 4 years ago
- Deep-learning Augmented RNA-seq analysis of Transcript Splicing☆115Updated last year
- Tools for sgRNA calling in direct capture Perturb-seq data☆38Updated 2 years ago
- APA Regression Net - Predict and Engineer Alternative Polyadenylation☆39Updated 4 years ago
- Python module for the easy handling and analysis of DNase-seq data☆37Updated 6 years ago
- RAGE-seq scripts☆18Updated 4 years ago
- ☆34Updated 6 years ago
- ☆24Updated last year
- Prediction of Active Enhancers and Promoters in a Cell type specific manner using shape matching of histone and/or DNase-I hypersensitivi…☆19Updated 7 years ago
- splicing and feature maps for RBPs☆25Updated 3 years ago
- Predicting gene expression levels from genomic sequences☆55Updated 5 years ago
- ☆68Updated 5 months ago
- A single-cell and spatial RNA-seq database for Alzheimer’s Disease☆26Updated last year
- Extracting disease-specific genomic coordinates from GWAS catalog☆21Updated 5 years ago
- Tissue-specific variant effect predictions on splicing☆42Updated 2 years ago
- ☆51Updated 2 years ago
- A pipeline for identifying indel derived neoantigens using RNA-Seq data☆30Updated 3 years ago
- a computational tool for analyzing single cell Hi-C data☆25Updated last year