tomcm39 / COVID19_expert_surveyLinks
A repository of the data and code used for aggregating expert predictions of COVID19
☆11Updated 3 years ago
Alternatives and similar repositories for COVID19_expert_survey
Users that are interested in COVID19_expert_survey are comparing it to the libraries listed below
Sorting:
- ☆17Updated 4 years ago
- modelling SARS-CoV-2 vaccine efficacy from antibody titres, and impact of waning and variants on transmission☆17Updated last year
- R package for estimation and monitoring of the effective reproduction number in a pathogen outbreak/epidemic☆11Updated 11 months ago
- An R package for Bayes Linear emulation and history matching.☆16Updated 2 weeks ago
- Two-stage interrupted time series analysis of excess mortality in Italy during the COVID-19 pandemic☆16Updated 6 months ago
- Excess deaths due to COVID-19 pandemic in 2020☆11Updated 3 years ago
- Scripts and data for Modelling reporting delay for disease surveillance data using Bayesian methods.☆16Updated 6 years ago
- Analysis of COVID-19 transmission using cluster size distribution☆11Updated 3 years ago
- Bayesian Modelling in Epidemiology Case Line Lists☆14Updated last year
- Estimate epidemiological quantities from repeated cross-sectional prevalence measurements☆17Updated last year
- This repository supports epidemiological and disease-dynamic analyses of data from the REal Time Assessment of Community Transmission (RE…☆17Updated last year
- Code associated with A population-level SEIR model for COVID-19 scenarios (updated) by James P. Gleeson, Thomas Brendan Murphy, Joseph D.…☆10Updated 4 years ago
- Covid-19 epidemiology - data and analysis☆11Updated last year
- Repo for the course Statistical Methods in Infectious Disease Epidemiology at UZH☆19Updated 3 years ago
- Bayesian nowcasting with adjustment for delayed and incomplete reporting to estimate COVID-19 infections in the United States☆27Updated 2 weeks ago
- epidemia package☆48Updated 3 years ago
- Accompanying code for: Kucharski AJ, Klepac P et al. Effectiveness of isolation, testing, contact tracing, and physical distancing on red…☆13Updated 2 years ago
- Repository to the R package nowcaster, nowcasting with INLA☆22Updated last week
- Bayesian spatio-temporal methods for small-area estimation of HIV indicators (PhD thesis, Imperial College London, 2023)☆16Updated last week
- R package for deriving social mixing matrices from survey data.☆40Updated this week
- A fast and flexible Bayesian tool for estimation of the time-varying reproduction number.☆19Updated 10 months ago
- Supplementary code for paper "Bayesian workflow for disease transmission model".☆27Updated 4 years ago
- ☆20Updated 2 years ago
- Utilities for Scoring and Assessing Predictions☆56Updated this week
- ☆10Updated 11 months ago
- Optimised estimates of reproduction numbers over time, which extract more information from an incidence curve than many conventional appr…☆22Updated last year
- Data and code to support Barnard et al., Modelling the medium-term dynamics of SARS-CoV-2 transmission in England in the Omicron era, Nat…☆12Updated 3 years ago
- Quantifying the impacts of public health interventions on transmission of COVID-19 in Australia☆13Updated 2 years ago
- Infectious disease model library and utilities☆14Updated 2 years ago
- R Package for individual based epidemiological models☆30Updated 2 weeks ago