gasparrini / ItalyCOVIDdeathLinks
Two-stage interrupted time series analysis of excess mortality in Italy during the COVID-19 pandemic
☆17Updated 8 months ago
Alternatives and similar repositories for ItalyCOVIDdeath
Users that are interested in ItalyCOVIDdeath are comparing it to the libraries listed below
Sorting:
- Scripts and data for Modelling reporting delay for disease surveillance data using Bayesian methods.☆16Updated 6 years ago
- R Package for individual based epidemiological models☆30Updated 2 months ago
- ☆20Updated 2 years ago
- Repository to the R package nowcaster, nowcasting with INLA☆22Updated last month
- Bayesian spatio-temporal methods for small-area estimation of HIV indicators (PhD thesis, Imperial College London, 2023)☆16Updated 2 months ago
- Excess deaths due to COVID-19 pandemic in 2020☆11Updated 3 years ago
- Bayesian Modelling in Epidemiology Case Line Lists☆14Updated 3 weeks ago
- Course on nowcasting and forecasting of infectious disease dynamics☆21Updated this week
- Accompanying code for: Kucharski AJ, Klepac P et al. Effectiveness of isolation, testing, contact tracing, and physical distancing on red…☆13Updated 2 years ago
- Examples on INLA within MCMC☆12Updated 8 years ago
- Stand alone markdowns with embedded shiny apps for various eco&epi models☆24Updated 2 years ago
- Fit stochastic differential equation models with time-varying parameters☆15Updated 5 months ago
- CRAN Task View: Epidemiology☆24Updated 3 weeks ago
- Short course on parametric survival analysis☆15Updated 11 months ago
- Quantifying the impacts of public health interventions on transmission of COVID-19 in Australia☆13Updated 2 years ago
- ☆31Updated 2 weeks ago
- Stochastic epidemiological branching simulation☆10Updated 4 years ago
- modelling SARS-CoV-2 vaccine efficacy from antibody titres, and impact of waning and variants on transmission☆17Updated last year
- Epidemiological agent-based modelling packages in both python and C++. Published at: https://doi.org/10.5334/jors.449.☆20Updated last month
- Survival modelling via ODEs☆11Updated 7 months ago
- HMC and other derivative-based MCMC sampling algorithms for the nimble package☆13Updated 4 months ago
- R package for estimation and monitoring of the effective reproduction number in a pathogen outbreak/epidemic☆11Updated last year
- A fast and flexible Bayesian tool for estimation of the time-varying reproduction number.☆20Updated last month
- ☆18Updated 2 years ago
- Grouped dates in R☆20Updated 2 months ago
- Data and code to support Barnard et al., Modelling the medium-term dynamics of SARS-CoV-2 transmission in England in the Omicron era, Nat…☆12Updated 3 years ago
- Joint modeling multivariate longitudinal and time-to-event outcomes with INLA☆21Updated 3 weeks ago
- A penalized version of distributed lag linear and non-linear models☆13Updated 6 months ago
- EcoEpi shinyApps☆18Updated 6 years ago
- Analysing epidemic trends using AutoML approaches.☆19Updated 4 years ago