goldingn / neuts2efficacyLinks
modelling SARS-CoV-2 vaccine efficacy from antibody titres, and impact of waning and variants on transmission
☆17Updated last year
Alternatives and similar repositories for neuts2efficacy
Users that are interested in neuts2efficacy are comparing it to the libraries listed below
Sorting:
- Estimate epidemiological quantities from repeated cross-sectional prevalence measurements☆17Updated last year
- Implication of overdispersed transmission of COVID-19 on the effectiveness of contact tracing☆8Updated 4 years ago
- Bayesian Modelling in Epidemiology Case Line Lists☆13Updated last year
- Infectious disease model library and utilities☆14Updated 2 years ago
- Data and code to support Barnard et al., Modelling the medium-term dynamics of SARS-CoV-2 transmission in England in the Omicron era, Nat…☆12Updated 2 years ago
- Scripts and data for Modelling reporting delay for disease surveillance data using Bayesian methods.☆15Updated 5 years ago
- Create Contact Matrices from Population Data☆20Updated 3 weeks ago
- An R package for Bayes Linear emulation and history matching.☆16Updated 2 months ago
- Analysis of COVID-19 transmission using cluster size distribution☆11Updated 2 years ago
- ☆10Updated 8 months ago
- Estimate epidemiological delay distributions with brms☆15Updated last month
- An R package for the analysis of infectious disease transmission data☆10Updated 3 years ago
- ☆29Updated 2 months ago
- Accompanying code for: Kucharski AJ, Klepac P et al. Effectiveness of isolation, testing, contact tracing, and physical distancing on red…☆13Updated 2 years ago
- Optimised estimates of reproduction numbers over time, which extract more information from an incidence curve than many conventional appr…☆22Updated last year
- Tools to enable flexible and efficient hierarchical nowcasting of epidemiological time-series using a semi-mechanistic Bayesian model wit…☆61Updated this week
- R package with social contact data for 177 regions (Prem et al. 2017; Prem et al. 2021)☆9Updated 5 months ago
- Bayesian spatio-temporal methods for small-area estimation of HIV indicators (PhD thesis, Imperial College London, 2023)☆16Updated 5 months ago
- Repository to the R package nowcaster, nowcasting with INLA☆21Updated this week
- ☆17Updated 4 years ago
- Course on nowcasting and forecasting of infectious disease dynamcis☆17Updated this week
- An R package and Bayesian generative model to estimate epidemiological parameters from wastewater concentration measurements over time.☆22Updated this week
- A repository to store COVID-19 variant nowcasts collected as a modeling hub.☆17Updated this week
- Quantifying the impacts of public health interventions on transmission of COVID-19 in Australia☆13Updated 2 years ago
- R Package for individual based epidemiological models☆30Updated 8 months ago
- A fast and flexible Bayesian tool for estimation of the time-varying reproduction number.☆19Updated 7 months ago
- Epidemiological agent-based modelling packages in both python and C++. Published at: https://doi.org/10.5334/jors.449.☆18Updated 3 weeks ago
- CRAN Task View: Epidemiology☆22Updated 3 weeks ago
- R package for estimation and monitoring of the effective reproduction number in a pathogen outbreak/epidemic☆11Updated 8 months ago
- ☆14Updated last year