mhoehle / STA427_SM4IDELinks
Repo for the course Statistical Methods in Infectious Disease Epidemiology at UZH
☆19Updated 3 years ago
Alternatives and similar repositories for STA427_SM4IDE
Users that are interested in STA427_SM4IDE are comparing it to the libraries listed below
Sorting:
- Infectious disease model library and utilities☆14Updated 2 years ago
- Course on nowcasting and forecasting of infectious disease dynamics☆19Updated 2 weeks ago
- modelling SARS-CoV-2 vaccine efficacy from antibody titres, and impact of waning and variants on transmission☆17Updated last year
- Create Contact Matrices from Population Data☆20Updated 2 months ago
- R package with social contact data for 177 regions (Prem et al. 2017; Prem et al. 2021)☆9Updated 7 months ago
- R package for estimation and monitoring of the effective reproduction number in a pathogen outbreak/epidemic☆11Updated 10 months ago
- Monte-Carlo State Space Models☆19Updated last year
- Accompanying code for: Kucharski AJ, Klepac P et al. Effectiveness of isolation, testing, contact tracing, and physical distancing on red…☆13Updated 2 years ago
- Covid-19 epidemiology - data and analysis☆11Updated last year
- CRAN Task View: Epidemiology☆23Updated 3 weeks ago
- Two-stage interrupted time series analysis of excess mortality in Italy during the COVID-19 pandemic☆16Updated 5 months ago
- This repository supports epidemiological and disease-dynamic analyses of data from the REal Time Assessment of Community Transmission (RE…☆17Updated last year
- ☆14Updated last year
- Estimate epidemiological quantities from repeated cross-sectional prevalence measurements☆17Updated last year
- Quantifying the impacts of public health interventions on transmission of COVID-19 in Australia☆13Updated 2 years ago
- Data and code to support Barnard et al., Modelling the medium-term dynamics of SARS-CoV-2 transmission in England in the Omicron era, Nat…☆12Updated 2 years ago
- Analysing epidemic trends using AutoML approaches.☆18Updated 4 years ago
- Excess deaths due to COVID-19 pandemic in 2020☆11Updated 3 years ago
- An R package for the analysis of infectious disease transmission data☆10Updated 3 years ago
- Bayesian nowcasting with adjustment for delayed and incomplete reporting to estimate COVID-19 infections in the United States☆27Updated last month
- R package to implement and visualize several epidemiological forecasting methods.☆20Updated 11 months ago
- ☆30Updated this week
- Tool-set to support Bayesian evidence synthesis in R☆23Updated 2 months ago
- Simulate Survival Data☆24Updated 4 years ago
- R Package - Dynamical Systems Approach to Infectious Disease Epidemiology☆26Updated last year
- Compute and visualise incidence (reworking of the original incidence package)☆17Updated last month
- Iterate multiple realisations of stochastic models☆20Updated 3 months ago
- Analysis of COVID-19 transmission using cluster size distribution☆11Updated 3 years ago
- EcoEpi shinyApps☆18Updated 5 years ago
- A fast and flexible Bayesian tool for estimation of the time-varying reproduction number.☆19Updated 8 months ago